Rhizobium sp. Kim5: Kim5_CH00874
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Entry
Kim5_CH00874 CDS
T05501
Name
(GenBank) polysaccharide biosynthesis CapD-like protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00541
Biosynthesis of various nucleotide sugars
rhk00552
Teichoic acid biosynthesis
rhk01100
Metabolic pathways
rhk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Kim5_CH00874
00552 Teichoic acid biosynthesis
Kim5_CH00874
Enzymes [BR:
rhk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
Kim5_CH00874
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
CoA_binding_3
3Beta_HSD
adh_short
DapB_N
KR
CoA_binding
PglD_N
adh_short_C2
NmrA
Motif
Other DBs
NCBI-ProteinID:
ARQ56981
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Position
complement(871999..873945)
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AA seq
648 aa
AA seq
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MPMQALVAPLLAMPRVAKRALALLVDSSFCVLTIWLAYCFRLNEWTVLTGVQWLPVFVSL
CMALPIFIVMGMYRAIFRYANMAAFITVLKAIAIYGVAFMTIFTALSVPGVPRTVGILQP
FLLLIAIGLSRLGIRYWLGDAYQRILHKNMLAKVLIYGAGKAGRQLAAALTNSAELNVVG
YLDDDPRLKGGVMGGLPIYDPSDLPVLAESLGVHNVLLALPSASRQRRNEILEHVRKARV
NVRTLPDLTALAQGRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRKKVVMVTGAGGSI
GGELCRQILRNAPSTLILIDQNEFALYSIDAELRKLAELYRHENLQIVPILCSVRDQDRM
EHVMQSWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLITARAANKCGVLNFVLISTD
KAVRPTNVMGASKRLAEMVLQALAAESTTHRMRTNFSMVRFGNVLGSSGSVVPLFRQQIK
DGGPVTLTHPKITRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLARKMVELS
GLTVRDEDNPEGDIELSVTGLRPGEKLYEELLIGDNPETTEHPRIMKAREDFLVWPELSR
RVNALNAALDRNDMIAARATLAELVSGYSSTGEVSDLAFTGADANTTA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgcaagcgctcgtcgcgcctttgctggcgatgccgcgggttgccaaacgcgct
ctggctttgctggtggattcaagcttttgtgttctgacgatctggctggcctattgcttc
cgcctgaacgaatggacggtgctgaccggtgtgcagtggctgccggttttcgtttcactg
tgcatggcccttcccatcttcatcgtcatgggcatgtatcgggcgatcttccgttatgcc
aatatggctgctttcattactgttctgaaggcgattgcgatctacggcgttgccttcatg
acgatatttacagcactcagcgtccccggtgttccgagaaccgtcggcattctccagccg
ttcctgctgttgattgcgatcgggctgtcgaggttgggtatccgctattggctcggggat
gcctaccagcggatccttcacaagaatatgctcgccaaggtgctgatctacggggcaggc
aaggccgggcggcaactggcggctgccctgacgaacagcgccgagcttaatgtcgtcggc
tacctggatgatgatccgcgtcttaagggcggcgtcatgggcggcctgccgatctacgac
ccgtcggatcttccggtgcttgccgaatctctcggcgtgcacaacgtgcttcttgctctt
ccctccgcatcgcggcagcgccgcaacgaaatcctggagcacgtccgtaaagccagggtc
aatgttcgcacgttgccggatctcactgccctggctcagggccgtgtcgcggtctccgac
attcgtgagctggagatcgaagacctgctgggaagggaagcggtggcgccgcgccaggaa
ttgctcgacaaggcgatgcgcaaaaaggtggttatggtcaccggcgccggcggttccatc
ggcggtgaactttgtcgccagattctgcgcaatgcgccttcaaccctcatcctcatcgat
cagaacgagtttgcgctttacagtattgacgccgaattgcggaagctggccgaactgtac
agacatgaaaatctgcagatcgtcccaatcctctgttctgtccgcgatcaggatcgcatg
gaacatgtcatgcagagctggcgacctcagacgctctatcatgcagccgcttacaaacat
gttccccttgtcgaacacaatgccgtggagggcatcaagaacaatgtgatggggacgctg
atcaccgcacgcgcggcgaacaaatgcggcgtcttgaattttgtgctgatcagcacggac
aaggccgtgcgtccgacaaatgtgatgggcgccagcaagaggctggcggagatggttctg
caggcgctcgcagcggaatcgactacccacagaatgcggacgaatttctccatggtccgt
ttcggaaacgtgctcggctcctccggatccgtcgtgccgcttttccggcagcaaatcaag
gacggcgggccggttaccctgacccacccgaaaataacccgctacttcatgaccatttcg
gaggcctcgcaactggtcattcaggcgggcgcgatggccgagggcggggatgttttcctg
ctcgacatgggcgagcccgtccgcatcgcagacctcgcccgcaagatggtcgagctttcg
ggattgaccgtccgcgacgaggataatcccgaaggggacatagagctttccgttaccggc
ctgaggcccggcgagaagctttatgaagaactgttgatcggggataaccctgaaacaacc
gaacatcctcggatcatgaaggcgcgcgaggatttcctggtctggcccgagctgtcgcga
agggtcaacgcgctcaacgcggcattggaccggaacgatatgatcgctgcacgtgcgacc
ttggcagagcttgtttccggatattcgtcaacgggtgaggtctcggatctggctttcacg
ggcgccgacgccaataccaccgcctga
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