Rhizobium sp. Kim5: Kim5_CH00915
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Entry
Kim5_CH00915 CDS
T05501
Name
(GenBank) outer membrane autotransporter barrel domain-containing protein
Organism
rhk
Rhizobium sp. Kim5
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Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
ARQ57021
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Position
915816..918914
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AA seq
1032 aa
AA seq
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MDERTGGAAIHRMAMLRLAGSASTAALALMLAAEPGWAQQVITGNDTEIVDGNDPGGTGS
GTQPAPWTINTDLVIGDQNGDDATLIIRNGGAVSNDTGVLGVDPGASGTVTVTGSGSSWS
NSDDLYIGHQGTGALTIEDGAVVDNQFGYIGYFSGASGTVTVTGTGSNWTNFQDLTIGDS
GTGTLIISNGGTVNSASGYISNDSNAIGEVIVTGANSLWSNSIEVSVGAAGAGTLTISNG
GSVTGSFGYVGFSSNGSGVVSVTGAGSSWISSGALVVGQFGSGSVSIDDAGMVSASEVVI
ADDSGATGTVELAGSAGSGRGILETGYVERGGGSASLVFDGGILRATGNEANFLRGFSVG
EVTLDAGGAFVDTNGFAVGITTDLQGVGGLTKQGTGTLTLSGINAYTGVTTVEAGTLVAG
SAGAFVQNGAYTVNGGILDLGGFDLTMGELSGSGGEIALGGADLTLDQASDSIYGGTLSG
SGDFTMAGSGTLRLTGDNSAFTGTTTVSDGHLIVNGSLGGILTMTGGRLGGSGDIGALTA
GAGVTIAPGNSIGTLTVGGNLTFDSGATYEVEVDPAGTASDLISVTGIAFLNGATVSHIG
MNGHYKPFSTYTILTASGGVSGTFGAVTSNYTFLAADLSYDLNNVYLEIARNDVSFSDMT
ATRNQFAVAQATETLGVGNDIYDAIVTLPDDESQVQASFDALSGEIHASIKTALITQSLF
LREAANDRLRSAFGDPGAAMVPIQAFWPGAPAVTAGEAADGPVFWSTALGGLSETFTDGN
AATFRHQTGGFLAGVDSNFDEVRFGLMAGYSNSRFDPRHRASSGSSDDYHLGLYAGTHWG
GLAFRSGLSHTWHDIDTSRRVAIGSFEDRLDANYGAGTLQGFAELGYRFDRAAVSFEPFV
NLAHVGIRTEGFSEKGGAAALDVSGRTTNTTITTLGLRAETEIRLGETSAVLHGMSGWRH
AAGDIVPLSTQAFAGSDAFTVAGVPLAENAFVLDAGLDVALNEGAALGIAYSGQVAEDAQ
QHGVKATLSVKF
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaggacaggcggggcggcgatccatcgcatggccatgctgcggctcgcgggc
tcggcgagcactgcggcgctggcgctgatgctggcagcagagccgggatgggcgcagcag
gtcattaccggcaacgacacggagatcgtcgacggcaacgacccgggcggcaccggctcg
ggcacgcagccggctccctggaccatcaataccgatctcgtcattggcgatcagaatggc
gacgatgcgaccctcatcatccgcaatggcggcgcagtcagcaatgataccggcgtgctc
ggcgtcgatcccggcgccagcggtacggtgacggtcaccgggtcgggctcgagctggagc
aattccgacgacctttatatcggccatcagggcaccggcgcactgaccatcgaagacggc
gctgtggtcgacaaccagttcggctatatcggttatttctccggcgccagcggcacggta
acggtgaccggtacaggttcgaactggacgaacttccaggatctcactatcggcgacagc
ggcaccggcactttgatcatttcgaatggcgggacggtcaacagtgcatccggctatatc
agcaacgattccaacgccattggcgaggttatcgttacaggcgcaaactcgctgtggagc
aattccatcgaggtctcggtcggcgcggccggcgcgggaacgctgaccatttccaatggc
ggctctgtcaccggcagcttcggttatgtcggcttcagttcgaacggcagcggcgtggtc
agcgtgaccggtgccggatcgagctggatcagttccggcgcgctcgtcgtcggccaattc
ggttcaggcagcgtgagcatcgacgatgccggcatggtatcggcgtccgaggtcgttatc
gccgatgattccggggctaccggcactgtggaacttgccggaagcgccgggagcgggcgc
ggcatcctggaaaccggctatgtcgagagaggcggtggcagtgccagcctcgtcttcgac
ggcggcattctgcgggctacgggcaacgaggcgaatttcctgcgcggcttcagtgtcggg
gaagtgacgctcgacgccggcggcgcctttgtcgacaccaacggctttgctgtcggcata
accacggatttgcagggcgtcggcggcctgaccaagcagggcaccggcacgctgacgctg
tccggcatcaacgcctataccggcgtgacgacggtcgaggccggcacgctggtcgcgggc
agcgccggcgccttcgtgcagaacggcgcctatacggtgaatggcggcatactcgatctc
ggcggcttcgacctgaccatgggtgagctttcgggaagcggcggggagatcgcgctcggc
ggcgccgacctcacgctcgatcaggcgagcgacagtatctatggcggcactctctccggc
agcggcgacttcacgatggccggcagcggcaccctgcgtctgaccggcgacaattccgcc
tttaccgggacgacgacggtttcggacggccacctgatcgtcaatggcagccttggcggc
atcctgacgatgacgggcggcagattgggcggctcaggtgatatcggcgcgttgaccgcc
ggggcaggcgtcaccatcgcgccgggtaattcgatcggaaccttgaccgttggcggcaat
ctcactttcgattcgggcgctacttatgaggtcgaggtcgatcccgccggcaccgccagc
gatttgatctcggttaccggcatcgcctttctcaacggcgcgaccgtttcccatatcgga
atgaatggccactacaagcccttctccacctatacgatcctcaccgcgagcggcggggtg
agcggaacctttggcgccgtcacctccaattatacctttctggccgccgacctctcctat
gatttgaacaatgtctacctggaaattgcccgcaatgatgtgagcttcagcgacatgacg
gccacgcgcaaccagtttgccgtggcgcaggctaccgagacgcttggcgtcggcaacgac
atctacgatgccatcgtcaccttgcctgacgacgagtcgcaagttcaggcgagcttcgac
gcgctttccggcgaaatccatgcctcgatcaagacggcgttgatcacccagagcctcttt
ctccgcgaggccgccaacgaccgtctgcgctccgctttcggcgatcccggcgccgccatg
gttccgatacaagccttctggccgggcgctccggcagtgaccgccggcgaagctgcggac
gggccggtcttctggagtacggcccttggtggtctgagcgagacattcacggatggcaat
gccgccacattccgccatcagacgggcggctttcttgccggtgtcgacagcaatttcgac
gaggtcaggttcggcctgatggccggctacagcaattcccggttcgatccccgtcaccgt
gcttcgtcgggttcgagcgacgattatcatctcggcctctatgccggtacgcactggggc
ggtctcgccttccggtccggcctctcccatacctggcatgacatcgacaccagccgccgt
gtcgcgatcggcagcttcgaggacaggctcgacgcgaactatggggccggcacgctgcag
ggctttgcggaactcggttatcggttcgacagggcggcagtctcttttgagcctttcgtc
aatctcgcccatgtgggcattcgaacggagggcttttccgaaaagggcggggcggccgca
ctcgacgtctccggccgcacgaccaacaccaccatcaccacgctcggcctgcgtgccgaa
acggagatccgcctgggagagacgagtgccgtcctgcacggcatgtcaggctggcgccat
gccgccggcgatatcgtccccctgtcaacgcaggctttcgcaggaagcgatgccttcacc
gtcgccggcgtgccgctggctgagaacgccttcgttctcgacgccggccttgacgtcgcc
ctgaacgaaggtgctgcgctcgggatcgcctattccggccaggtcgcggaagacgcccag
cagcatggggttaaggcgacgctgtctgtgaagttctaa
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