Rhizobium sp. Kim5: Kim5_CH00952
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Entry
Kim5_CH00952 CDS
T05501
Name
(GenBank) RsuA/RluB/C/D/E/F family pseudouridylate synthase protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhk03009
]
Kim5_CH00952
Enzymes [BR:
rhk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Kim5_CH00952
Ribosome biogenesis [BR:
rhk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Kim5_CH00952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ARQ57058
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Position
956481..958538
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AA seq
685 aa
AA seq
DB search
MTSKDKPKRPGAKPFSRDAGTKAGPKAGGAKPAKAAAARPTAPETESDAKAERISKVMAR
AGVASRRDIERMIMEGRVTLNGRVLETPVVNVTLADRIEVDGVPIRGIERTRLWLYHKPA
GLVTTNADPEGRATVFDNLPEELPRVMSIGRLDINTEGLLLLTNDGGLARALELPATGWL
RRYRVRAHGEIDQEALDKLKDGIAVDGVLYGSIEATLDRTQGSNVWITMGLREGKNREIK
NVMGALGLDVNRLIRISYGPFQLGDLPEGHVIEVRGRTLRDQLGPRLIEEAKANFDAPIY
NAPAVAAEEEAQAPVPEKRERPRRDEDKRERALSRLDTKRDDRRGGGRREDDRRDGGRFD
DDKPKRPQPLGQRRSANVWMAPGARPLGEKAAAKAAKNAQTARRRGEERPAKGTGSHHIE
DRPRTQINRVREEDGEWIRSSEQPSRKDEGEGSGRKRSFGDRPAREDRGFGVRPARGERR
PRDAGDERPRARTRDAGDERPRARSSAGEGRPERPRGDRPFGDRPSRGDRPFGDKPRGDR
KPRADGDERPRAARASTGEARSERPRGDRPFGDRPSRGDRPFGDKPRGDRRPREDGDERP
RAARSFAGEGRSERPRGERSFGDKPSGDKPRGKGFGAKPGGAKNFSGKPKGKPGSDRPGG
DRPAGGPSRGGAKGKGMTRGADRRR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaaagacaagccaaaacgcccgggcgcaaagcccttttcacgcgacgccggg
accaaggccggtccgaaagcgggtggcgcgaagccggcaaaggctgcagccgcgcgcccg
actgcgcccgaaaccgagagcgacgccaaggccgaacgcatttccaaagtgatggcgcgc
gccggcgtcgcctctcgccgcgacatcgaacgcatgatcatggaaggccgggtgacgctg
aacggcagggttctcgaaactcccgtcgtcaacgtcacgcttgccgaccgcatcgaggtc
gacggtgtgccgatccgcggcatcgagcgcaccaggctgtggctctatcataagccggcc
gggctggtgaccaccaatgccgatccggaaggccgcgcgaccgtcttcgacaacctgccg
gaagaactgccgcgcgtcatgtcgatcggccgtctcgatatcaacaccgaaggcctgctg
ctgctgaccaatgatggtggtcttgcccgcgcgctcgagctgccggcgaccggctggttg
cgccgctaccgcgtccgcgcccatggcgagatcgatcaggaggcgctcgacaagctgaag
gacggcatcgccgtcgacggcgtgctctatggctcgatcgaggcgacgctcgaccgcacg
caaggctcgaatgtctggatcaccatgggcctgcgcgaaggcaagaaccgcgaaatcaag
aacgtgatgggcgcgctcggcctcgacgtcaaccgtctgatccgcatttcctacggcccg
ttccagctcggcgacttgccggaaggccatgtcatcgaagtacgtggccgcacgctgcgc
gatcagctcggcccgcgcctgatcgaggaagccaaggcgaatttcgatgcaccgatctac
aatgcgccggccgttgccgccgaggaagaggcgcaagccccagtaccggaaaaacgcgag
cggccgcgccgcgatgaggacaagcgcgaacgcgcgctgagccgcctcgacaccaagcgt
gacgatcgccgcggcggcggacgcagagaagacgaccgccgcgatggcggccgcttcgac
gacgacaagccgaagcgtccccagccgctcggccagcgccgcagcgccaatgtctggatg
gcgccgggcgcccggccgctcggcgaaaaggcggccgcgaaagccgccaagaacgcgcag
accgcgcgccggcgcggcgaagagcggccggcaaagggcaccggttcccaccatatcgag
gatcgcccgcgcacccagattaatcgcgtgcgcgaggaggacggcgaatggatccgctcg
agcgagcagcccagtcgcaaggatgagggcgaaggctccggccgcaagcgctctttcggg
gatcgcccggcgcgcgaggatcgcggctttggcgtccgcccggcgcgcggtgaacgccgc
ccgcgcgacgcgggtgacgaacgtccgcgtgccagaacgcgcgacgcgggtgacgaacgt
ccgcgtgccagaagctctgccggcgaaggccggccggaacgtccacgcggtgaccggcct
ttcggcgatcgtccctcgcgtggtgaccggcccttcggcgacaagccgcgcggtgaccgc
aagccgcgtgcggatggcgacgagcgtcctcgtgccgccagagcctccaccggcgaagcc
cgttcggagcgtccgcgcggcgaccggcctttcggcgatcgtccttcgcgtggcgaccgc
ccattcggcgacaagccgcgtggcgaccgcagaccgcgcgaggacggtgatgagcgcccg
cgggcagccagaagttttgccggtgagggtcgctccgagcgtccgcgcggcgaaagatcg
ttcggcgacaagccttcgggggacaagccgcgcggcaagggcttcggcgccaagcccggt
ggggcgaagaatttctccggcaagccgaagggcaagccaggcagtgacaggccgggcggc
gacaggcctgcgggcggcccgtccagaggtggtgcaaaaggaaagggcatgacgcgcggt
gcggatcgtcggcggtga
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