Rhizobium sp. Kim5: Kim5_CH01030
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Entry
Kim5_CH01030 CDS
T05501
Name
(GenBank) tRNA (uracil-5-)-methyltransferase protein
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhk03009
]
Kim5_CH01030
Enzymes [BR:
rhk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Kim5_CH01030
Ribosome biogenesis [BR:
rhk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Kim5_CH01030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
Methyltransf_31
TRAM
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_25
Methyltransf_12
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ARQ57136
LinkDB
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Position
complement(1041752..1043002)
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AA seq
416 aa
AA seq
DB search
MSTETVTIEKLGAQGDGIAGSAGGPVYVPFSLPGETVAIARVKSQGTIMSIATPSPDRQE
PPCRHFGPDGVNGTCGGCTLQHLADAPYRAFKRQLVVDALRSKGLTPEVGDIVPARPGER
RRVVFAARKTEKDMLIGFNQAESHHIVAIEECPISSAGIVARLPAIKAIAAALAISAEPF
RVAVLETLSGLDIAADDIKKLSDPQRRKAIETVLGLRGIARVTLNGEILVEPAKPIVDFG
GVEVSPPAGGFAQATKPAEEAMAELVLAHAGKAKRIVDLFAGAGTFSLRLAQIGRVHAVE
AEAAALAALDQAARKTQGLKPVSVEKRDLFRRPLMTQEFKPFDMVVFDPPRAGAEFQCKE
LARSGVKKIAAVSCNPLTLARDLQILVEGGYRITGVTPIDQFLWSSHVEVVATLEK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgaaaccgtcacgatcgagaagctcggcgcccagggcgacggcattgcaggc
agcgccggcgggccggtctacgtgcccttttccctgcccggggaaacggtggcgatcgcc
cgcgtcaaaagccagggcacgatcatgtcgattgcgacgccctcgcccgaccgacaggag
ccgccctgtcggcatttcggcccggacggcgtcaacggcacctgcggcggttgcacgctg
cagcatctggcggatgccccctaccgcgccttcaagcggcagctggtcgtcgatgcgctg
agatccaagggtctgacgcctgaggtcggcgacatcgttccggcccggccgggcgaacgc
cggcgcgtggtgtttgcggcgcgcaagaccgaaaaagatatgttgatcggtttcaaccag
gccgaaagtcaccatatcgtcgccatcgaggaatgtccgatctcatcggccgggatcgtc
gcccggctgccggcgatcaaggcgatcgccgccgcgctggcgatcagcgccgaacccttc
cgggtggcggtgctcgagacgctttccggcctcgatatagcggccgacgacatcaagaaa
ctctccgacccgcagcggcgcaaggcgatcgaaaccgtgctcggcctgcgcggcatcgcc
cgcgtgacgctgaatggcgagattctcgtcgagccggccaagccgatcgtcgatttcggc
ggcgtcgaggtttcgccgccagcgggcggatttgcccaggcgaccaagcctgcggaagaa
gcgatggcggagctggtgcttgcccatgccggcaaggccaagcggatcgtcgatctcttt
gccggcgccggcacgttttcgctcaggctggcgcagatcggccgcgtccatgcggtcgag
gccgaggcggcggcgctcgccgccctcgaccaggccgcccgcaagacacaggggttgaag
ccggtcagcgtcgaaaagcgcgatctcttccgccgcccgctgatgacgcaggagttcaag
ccctttgacatggtcgtcttcgacccgccgcgggcgggtgccgagtttcagtgcaaggag
ctcgcccgctcaggcgtgaagaagatcgcagccgtcagctgcaatccgctgacgctggcc
cgtgaccttcaaatcctcgtcgagggcggctaccgcattaccggggtgacaccgatcgac
cagttcctctggagctcgcatgtcgaggtggtcgcgacgctggaaaaataa
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