Rhizobium sp. Kim5: Kim5_CH01031
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Entry
Kim5_CH01031 CDS
T05501
Symbol
tlyA
Name
(GenBank) hemolysin protein TlyA
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhk03009
]
Kim5_CH01031 (tlyA)
Enzymes [BR:
rhk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
Kim5_CH01031 (tlyA)
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
Kim5_CH01031 (tlyA)
Ribosome biogenesis [BR:
rhk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Kim5_CH01031 (tlyA)
23S rRNA modification factors
Kim5_CH01031 (tlyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
SYY_C-terminal
Methyltransf_25
Methyltransf_23
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
ARQ57137
LinkDB
All DBs
Position
complement(1042999..1043745)
Genome browser
AA seq
248 aa
AA seq
DB search
MSDQNSQRLDQLLVSRGLFASRSRARDALQRGTVRIAGQVVTKAGALFGVNADIAIDDPA
QDYVSRAALKLASALDHFRLDPAGHHCLDIGASTGGFTEVLLQRGAAHVTAIDVGHGQMH
PRISGDPRVTNREGLNARNLTAEDIGHPASFIVSDVSFISLKLALAPALDIAEPGAIAVL
LIKPQFEAGREAIGKGGLLKDPSSAPAVAAELERWFIEDRGWNSLGLIPSPIAGGDGNQE
FLLAGLKP
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcaaaacagccaacgcctcgaccagctgctcgtctcccgcggcctctttgcc
agccgctcgcgggcgcgcgacgccttgcagcgcggcacggtgcggatcgccggccaggtg
gtgacgaaggccggcgcgctcttcggcgtcaacgccgatatcgcaatcgatgatccggcg
caggattacgtctcgcgcgccgcattgaagcttgctagcgccctcgaccatttccggctc
gatccggccggccatcactgtctcgatatcggcgcgtccaccggcggcttcaccgaggtg
ctgctgcaacgcggtgctgcacatgtcacggcgatcgatgtcggccacgggcagatgcat
ccgcgcatctcaggcgatccgcgggtgacgaaccgggaaggcctcaacgcccgcaacctg
acggccgaggatatcggccaccccgccagtttcatcgtctccgacgtctccttcatctcg
ctgaagctggcgttggcgccggcccttgatatcgccgagccgggtgccatcgccgtgctg
ctgatcaagccgcagttcgaagcggggcgcgaggcgatcggcaagggcggattgttgaag
gatccctcgtctgcgcccgccgtcgctgcggaattggagcgctggttcatcgaggatcgg
ggctggaatagcctcggcctcatcccctccccgattgccggcggcgacggcaatcaggaa
tttcttctggcaggattgaaaccgtga
DBGET
integrated database retrieval system
