Rhizobium sp. Kim5: Kim5_CH01117
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Entry
Kim5_CH01117 CDS
T05501
Symbol
mutY
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Kim5_CH01117 (mutY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhk03400
]
Kim5_CH01117 (mutY)
Enzymes [BR:
rhk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Kim5_CH01117 (mutY)
DNA repair and recombination proteins [BR:
rhk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Kim5_CH01117 (mutY)
Prokaryotic type
Kim5_CH01117 (mutY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ARQ57222
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All DBs
Position
complement(1125420..1126511)
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AA seq
363 aa
AA seq
DB search
MTITTLDSLSAKPLLDWYDRHHRDLPWRVSPGMAARGVKPDPYRVWLSEVMLQQTTVQAV
KPYFAKFLERWPEVTDLAAAENDEVMAAWAGLGYYARARNLKKCAEAVAKDHRGVFPDTE
TGLKSLPGIGDYTAAAVAAIAFNRQAAVMDGNVERVISRLYAIEAPLPGAKPVMKDKVTL
LTPANRPGDFAQAMMDLGATICTPKRPACSLCPFRGSCQALKLCDPELFPVKTAKKEKPV
RQGAAFIAVTGDGEILLRRRAESGLLGGMTEVPTTAWTARLDGETSVTAAPFAAAWQACG
TVIHVFTHFELRLSIWRAAIVQKLEADDGWWEPVTNLEAQALPTVMKKAIAAAIPLAFKT
SRA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcacgacactagacagcctctctgcaaagcccctgctcgactggtacgaccgc
catcaccgcgacctgccctggcgggtgtcgcccggcatggcggcacgcggcgtcaaaccc
gatccctatcgcgtctggctgtcggaggtgatgctgcagcagacgacggtgcaggcggtc
aaaccctatttcgccaagtttctcgagcgctggcctgaggtgaccgaccttgccgccgcc
gagaacgacgaggtgatggccgcctgggcggggctgggctattacgcccgcgcccgcaac
ctgaagaaatgcgccgaagcggtggcgaaggaccatcgcggcgtctttcccgataccgaa
accggtctcaaatcgctgcccggcatcggcgactatacggcagccgccgtcgccgccatc
gcattcaaccggcaggcggccgtcatggacggcaatgtcgagcgggtgatttccaggctc
tatgcgatcgaggcgccacttccgggcgccaagcctgtgatgaaggacaaggtgacgctg
ttgacgcctgcgaaccggcccggcgatttcgcccaggcgatgatggatctcggcgcgacg
atctgcacgccgaagcggccggcctgttcgctctgtccgttccgcggatcgtgtcaggcg
ctgaagctttgcgatcccgaactctttccggtcaagacggcgaagaaggaaaagcctgtg
cggcagggtgccgccttcatcgcggtgaccggcgacggcgagatcctgctcaggcggcgc
gctgaaagcggcttgctcggcggcatgaccgaggtgccgacgacggcctggacggcgcgc
ctcgacggcgagacttccgtcacggccgcgcccttcgccgccgcctggcaggcctgcggc
accgtcatccatgtcttcacccatttcgagctcaggctgtcgatctggcgcgcggcgatc
gttcagaagctggaagcggatgacggatggtgggagccggttacaaatcttgaagcgcag
gccttgccgaccgtcatgaaaaaagcgatcgcagcggctattcctctcgcgttcaaaaca
tccagggcataa
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