Rhizobium sp. Kim5: Kim5_CH01164
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Entry
Kim5_CH01164 CDS
T05501
Name
(GenBank) serralysin-like metalloprotease domain-containing protein
Organism
rhk
Rhizobium sp. Kim5
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_5
Big_9
Cadherin_4
CshA_repeat
HemolysinCabind
Peptidase_M10_C
Motif
Other DBs
NCBI-ProteinID:
ARQ57267
LinkDB
All DBs
Position
complement(1175463..1180403)
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AA seq
1646 aa
AA seq
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MGATFWIGSDNKIHYDAAGISAQINALDAGEMFKDTIQYTIKMSNGTLSVGTLTVMINGI
NDAPVLSGNPATLAAGAEDTPYTFSTADLLAGFTDAEGDQMSVSGLTANHGALVDNNNGT
WTFTPDANYNGPVNLSYSVTDGNGGSVPASQSFTLAAVNDAPVLSGNAATLSVGTEDTAY
TFSTADLLAGFTDVDGDQLSVAGLTADHGALIDNNDGTWTFTPAENYNGPVSLSYSVTDG
NGGSVAASQSFALTAVNDAPVLSGNAATLAAGSEDTAYTFSSADLLAGFTDVDGDQLSVA
GLTAEHGALIDNNDGTWTFTPAENYNGPVSLSYSVTDGNGGSVAASQSFMLDAVNDAPVL
SGNGATLSAGAEDTAYTFSSADLLAGFTDVDGDQLSVSGLTANHGALVDNNDGTWTFTPD
ANYNGPVSLSYSVTDGNGGSVPASQSFTLAAVNDAPVLSGNAATMAAGSEDTAYTFSTAD
LLAGFTDVDGDQLSVAGLSADHGALVDNNDGSWTFTPDANYNGPVSLSYSVTDGNGGSVP
ATQSFTLAAVNDAPVLSGNAATLAAGSEDTPYTISSADLLAGFTDVDGDQLSVSGLTANH
GALVDNNDGSWTFTPDANYNGPVSLSYTVTDGNGGSVPASQSFTLDAVNDAPVLSGNAAT
LAAGSEDTPYTFSTADLLAGFTDVDGDQLSVAGLSADHGAFIDNNDGSWTFTPDANYNGP
VSLSYSVTDGNGGSVPASQSFTLDAVNDAPVLSGNAATLAAGTEDTPYTFSSADLLAGFS
DVDGDQLSVSGLSAEHGALVDNNDGTWTFTPDANYNGPVSLSYSVTDGNGGSVAASQSFM
LDAVNDAPVLSGNAATLVAGSEDTPYTFSTADLLAGFTDVDGDQLSVTGLTANHGALVDN
NDGTWTFTPDANYNGPVSLSYSVTDGHGGSVAASQSFTLDAVNDAPVLSGNAATLAAGTE
DTAYTFSTADLLAGFTDVDGDQLSVAGLTADHGALVDNNNGSWTFTPDANYNGPVSLSYS
VTDGNGGSVPATQSFTLAAVNDAPVLSGNAATLAAGSEDTPYTISSADLLAGFTDVDGDQ
LSVSGLTANHGALVDNNDGSWTFTPDANYNGPVSLSYSVSDGNGGSVPASQSFTLDAVND
APVLSGNAATLAAGTEDTPYTFSSADLLAGFSDVDGDQLSVAGLTADHGALVDNNDGTWT
FTPDANYNGPVSLSYSVTDGNGGSVPATQSFTLAAVNDAPVLSGNAATLAAGTEDTPYTF
SSADLLAGFTDVDADQLSVAGLTANHGALVDNNDGTWTFTPDANYNGPVSLSYTVTDGNG
GSVPASQSFTLDAVNDAPTAVVLSNTVTSAPENGGVIKLADIAVTDVDSGNNVLSLSGSD
AASFTILNGALYFNGGADFEAKAGYDVTVDVNDATVGGTPDAWQNFHLGITDVIESDSDT
SNDHDTDTATATTTNWGETNGVDTKVGNAGDNTISGGNSGDILYGQAGNDTLNGNNGADK
LYGQAGNDILIGSQGLDTLYGGSGNDTLNGSGEQDDLWGGSGNDTFVFTSVGDSTSVSPD
TIRDFHHGFDKIDVSGLDAYTVNPSIPGDQAFAWGGTTVTAHGAWYTESGGNTILHFDTN
GDANTDETTIVLTGTNLGLTDSDFLL
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaacattctggatcggcagtgacaacaagatccactatgacgcagccggtata
agcgcgcagatcaacgcgctcgatgccggagaaatgttcaaggacacgatccagtacacg
atcaagatgtcgaacggcacgctcagcgtcggcacgctgacggttatgatcaacggcatc
aacgacgcacccgtcctcagcggcaacccagcgacgctcgcggcaggcgccgaggacaca
ccctacacgttcagcaccgccgacctgcttgccggcttcaccgatgccgagggcgatcag
atgtcggtctccggcctcaccgccaatcatggcgccctggtcgacaacaacaacggcacc
tggaccttcacgcctgatgccaactacaacggcccggtcaacctcagctactccgtcacc
gacggcaatggcggcagtgtgccggcaagccagagcttcacgctggcggcggtcaacgac
gcccctgttctcagcggcaatgcggcgacgctttcggtaggcaccgaggacacggcctac
acgttcagcactgccgacctgctggccggcttcaccgatgtcgatggcgaccagctgtcg
gtcgccggcctcaccgccgatcatggcgccctcatcgacaacaatgacggcacctggacc
ttcacgccggccgaaaactacaacggcccggtcagcctgagctacagcgtcaccgatgga
aacggcggcagtgtcgcggcaagccagagctttgcgctgacggcggtcaacgacgcgcca
gtcctcagcggcaatgcggcaacgcttgcggcgggcagcgaggatacggcctacaccttc
agcagcgccgacctgctggccggcttcaccgatgtcgacggcgaccagctgtcggtcgcc
ggcctcaccgccgagcatggcgccctcatcgacaacaatgacggcacctggaccttcacg
ccggccgaaaactacaacggcccggtcagcctcagctacagcgtcaccgacggcaacggc
ggcagtgtcgcggcaagccagagcttcatgcttgatgccgtcaacgacgcccccgtcctc
agcggcaatggggcgacgctttcggcaggcgccgaggacacggcctacacgttcagcagc
gccgacctgctggccggcttcaccgatgtcgacggcgaccagctgtcggtctccggtctc
accgccaatcatggcgccctggtcgacaacaatgacggcacctggaccttcacacctgat
gccaactacaacggcccggtcagcctgagctacagcgtcaccgacggcaacggcggcagt
gtcccggcaagccagagcttcacgctggcggccgtcaacgacgcaccggtcctcagcggc
aatgcggcgacaatggcggcaggcagcgaggacacggcctatacgttcagcaccgctgac
ctgcttgccggctttaccgatgtcgacggcgatcagctgtcggtcgccggcctcagcgcc
gatcatggcgccctggtcgacaacaatgacggcagctggaccttcacgccggatgccaac
tacaacggcccggtcagcctgagctacagcgtcaccgacggcaacggcggcagtgtcccg
gcaacgcagagcttcacgctggcggcggtcaacgacgcaccggtccttagcggcaatgca
gcaacgctggcggcgggcagcgaggacacgccctacacgatcagcagcgccgacctgctg
gccggctttaccgatgtcgacggcgaccagctgtcggtctccggcctcaccgccaaccat
ggcgccctggtcgacaacaatgacggcagctggaccttcacgccggatgccaactacaac
ggcccggtcagcctcagctacaccgtcaccgacggcaacggcggcagtgtgccggcaagc
cagagcttcacgcttgatgcggtcaacgacgcacctgttctcagcggcaatgcggcgacg
cttgcggcgggcagcgaggacacgccctacaccttcagtactgccgacctgcttgccggc
ttcaccgatgtcgacggcgatcagctgtcggtcgccggcctcagcgccgatcatggcgcg
ttcatcgacaacaatgacggcagctggaccttcacgccggatgccaactacaacggcccg
gtcagcctcagctactccgtcaccgacggcaatggcggcagtgtgccggcaagccagagc
ttcacgcttgatgccgtcaacgatgcacctgttctcagcggcaatgcggcgacgctggcg
gcaggcaccgaggacacgccctacacgttcagcagcgctgacctgctggccggcttcagc
gatgtcgacggtgatcagttgtcggtctccggtctcagcgccgagcatggcgccctggtc
gacaacaatgacggcacctggaccttcacgccggatgccaactacaacggcccggtcagc
ctcagctactccgtcaccgacggcaacggcggcagtgtcgcggcaagccagagcttcatg
cttgatgccgtcaacgacgcccccgtcctcagcggcaatgcggcgacgcttgtggcgggc
agtgaggacacgccctacacgttcagcactgctgacctgctggccggcttcaccgatgtc
gacggcgaccagctctcggtcaccggcctgaccgccaatcacggcgccctggtcgacaac
aacgacggcacctggaccttcacgcctgatgccaactacaacggcccggtcagcctcagc
tactccgtcaccgacggccatggcggcagtgtcgcggcaagccagagcttcacgcttgat
gccgtcaacgacgcccccgtcctcagcggcaatgcggcgacgctggcggcgggcaccgag
gacacggcctacacgttcagcactgccgacctgctggccggcttcaccgatgtcgatggc
gaccagctgtcggtcgccggcctcaccgccgaccatggcgccctggtcgacaacaacaac
ggcagctggaccttcacgcctgatgccaactacaacggcccggtcagcctgagctacagc
gtcaccgacggcaacggcggcagtgtcccggcaacgcagagcttcacgctggcggcggtc
aacgacgcaccggtccttagcggcaatgcggcaacgctggcggcgggcagcgaggacacg
ccctacacgatcagcagcgccgacctgctggccggctttaccgatgtcgacggcgaccag
ctgtcggtctccggcctcaccgccaaccatggcgccctggtcgacaacaatgacggcagc
tggaccttcacgccggatgccaactacaacggcccggtcagcctcagctacagcgtcagc
gacggcaatggcggcagtgtgccggcaagccagagcttcacgcttgatgcggtcaatgat
gcacctgttctcagcggcaatgcggcgacgctggcggcaggcaccgaggacacgccctac
acgttcagcagcgctgacctgctggccggcttcagcgatgtcgacggcgaccagctgtcg
gtcgccggcctcaccgccgaccatggcgccctggtcgacaacaacgacggcacctggacc
ttcacgcctgatgccaactacaacggcccggtcagcctgagctacagcgtcaccgacggc
aatggcggcagtgtcccggcaacgcagagcttcacgctggcggcggtcaatgatgcacct
gttctcagcggcaatgcggcgacgctggcggcaggcaccgaggacacgccctacacgttc
agcagcgctgacctgcttgccggcttcaccgatgtcgacgctgaccagctgtcggtcgcc
ggcctcactgccaatcatggcgccctggtcgacaacaatgacggcacctggaccttcaca
cctgatgccaactacaacggcccggtcagcctgagctacaccgtcaccgacggcaatggc
ggcagtgtccccgcaagccaaagcttcacgcttgatgcggtcaatgatgcgccgacggcg
gttgtgttgtcgaacacagtgacgtcggcgcccgaaaatgggggcgtgatcaaacttgcc
gatatcgcagtcacggatgtcgattccggaaacaacgtgctgtcgctgtctggaagtgac
gccgcgtcattcacgatcctgaacggggcgctctacttcaacggtggcgcggacttcgaa
gcgaaggccggctacgacgtgaccgttgatgtgaatgatgcaacggttggcggcacgccg
gatgcctggcagaacttccatctcggcatcaccgacgtgatcgaaagcgacagcgatacg
agcaatgaccacgacacggacacagcgaccgccacgacgacaaattggggcgaaaccaac
ggtgtcgataccaaggtcggaaatgcgggtgacaatacgatcagcggcggcaactctggt
gatatcctctatggccaggcaggtaacgacacgctgaatggaaataacggcgccgataag
ctctacggccaggcaggtaacgacatactgatcggcagccaaggcttggacacgttgtac
gggggctccggcaacgacacgctcaatggcagcggcgagcaggatgacctttggggtggc
tccggcaatgacacctttgtgtttacctcagtgggcgacagcacgtccgtctccccggac
acgatccgtgacttccaccatgggtttgacaagatcgacgtgagcgggctcgacgcctac
acggtcaatcccagcatcccgggcgatcaagccttcgcctggggtggaacaacggtgacg
gcccacggtgcctggtacacggaaagcggcggcaacacgatccttcacttcgataccaac
ggggacgcgaataccgacgaaacgacgatcgtcttgacaggcacaaacctgggcttgacg
gattcggacttcctcctctga
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