Rhizobium sp. Kim5: Kim5_CH01252
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Entry
Kim5_CH01252 CDS
T05501
Name
(GenBank) LacI family transcriptional regulator protein
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhk03000
]
Kim5_CH01252
Transcription factors [BR:
rhk03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Kim5_CH01252
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_10
HTH_23
Sigma54_DBD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ARQ57353
LinkDB
All DBs
Position
1269507..1270544
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AA seq
345 aa
AA seq
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MSKSVERGKKPRRSAPVKLSDVAKKVGVSPITISRALRNPEIVSEDLREEILRAVEEMGY
IPNLAARALAGRHNGIVAVITPALHQYGFTSLMVGIEDRFRDTDLTVQYSNTLRHAEGEA
GLLKSFLTQKPAGVIIAGAESYRDLLPLIDNAACPIAHVTDLSQEPQKLVVGLDHYTAGA
EPTRFLLSRGYKRIAFFGRGADVRSLRRIEGYEAVMREARCFDPALIIGGDATSRTGLGR
ELFARLIERVPDVDAVFAQSDELALGVLIECKARGIRVPEEVGICGFNDLEFSAFIEPSL
TTVYIPRQDIGYRVADMLLRAIRDEPLDEDRVNCGFSIIPRGSTR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcggtggagcgggggaagaagccgaggcgcagcgcgcctgtgaagctcagc
gatgtggcgaagaaggtgggtgtcagcccgatcaccatctcgcgcgcgctgcgcaatccc
gaaatcgtctcggaggatctgcgcgaggagatcctgcgcgcggtcgaggagatgggctat
attcctaatctcgccgcccgggcgctggccggccgccacaacggcatcgtcgccgtcatc
acgcccgccttgcaccaatacggctttaccagcctgatggtcggtatcgaggatcgtttc
cgcgacaccgatctcaccgtgcaatattccaatacgctgcgccatgccgagggcgaggcc
ggcctgttgaaatccttcctgacgcagaagccggccggcgtcatcattgccggcgccgaa
tcctaccgcgatcttctgccgctgatcgacaatgccgcctgtcccatcgcccatgtcacg
gatctcagccaggagccgcagaagctggtcgtcggcctcgatcattatacggcaggcgcc
gaacccacccgtttcctgttgtcgagaggctacaagaggatcgccttcttcggccgcggc
gccgatgtccgctcgctccggcggatagaaggctatgaggcggtgatgcgggaagcccgg
tgtttcgaccccgctctcatcatcggcggcgatgcgacaagccggaccggcctcggccgg
gaactgtttgcccggctaatcgaacgcgtgcccgacgtcgatgccgtctttgcccagagc
gacgaactggcgctcggcgtccttatcgaatgcaaggcgcgcggcatccgcgtgccggag
gaggtcggcatctgcggcttcaacgatctggaattctccgccttcatcgagccgtcgctg
acgacggtgtacatcccgcgccaggacatcggttaccgcgtcgccgacatgctgctgcgc
gccatccgcgacgaaccgcttgacgaagacagggtcaattgcggtttttcgatcatcccg
cgcggctcgacacggtaa
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