Rhizobium sp. Kim5: Kim5_CH01425
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Entry
Kim5_CH01425 CDS
T05501
Name
(GenBank) penicillin binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00550
Peptidoglycan biosynthesis
rhk01100
Metabolic pathways
rhk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Kim5_CH01425
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Kim5_CH01425
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rhk01003
]
Kim5_CH01425
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhk01011
]
Kim5_CH01425
Enzymes [BR:
rhk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Kim5_CH01425
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Kim5_CH01425
Glycosyltransferases [BR:
rhk01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Kim5_CH01425
Peptidoglycan biosynthesis and degradation proteins [BR:
rhk01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Kim5_CH01425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ARQ57522
LinkDB
All DBs
Position
complement(1435101..1437284)
Genome browser
AA seq
727 aa
AA seq
DB search
MQDPDNPEKGPENETEKQAADPGRRPAKSRHILLRIDSWIDSTVWNAGFRAAEIWEDTTI
FFRRFRVRGWKRVVFELAGEGLTLGTVGAVLMLVLAQPAFEATKEDWRNRGDFAVTFTDR
YGNVIGHRGVIHQNSVPIDELPDSLIKSVLATEDRRFFDHFGIDAIGLFRAMVTNAQAGE
VVQGGSTLTQQLAKNLFLSNERSIDRKVTEAFLALWLEANLSKKEILSTYLDRAYMGGGT
FGAAAAAQFYFGKNITDVNLAESAMLAGLFKAPAKYAPHVNLPAARARANEVLTNLVQSG
LMTEGQVIAARRSPATVVDRNEVESPDFFLDWAFDEVQRLSPRFHQHSLIVRTTIDMGIQ
KAAEDSVETSLREYGEAYHAKQGALVMIENGGAVRAMVGGRDYGESQFNRATRALRQPGS
SFKVYTYALAMESGMTPQTTIVDAPIYWGNWSPHNYANRYVGRITLETAIAQSINTVPVR
LAKEKLGIQPIRAMAKNLGVETPIRDDVTIPIGTSEVTVLDQATAYATFPAGGYQSRRHG
ISQILDYEGDVLYDFDRDEPAPKRVLSEQADAYMNQMLSRVPYVGTARKAALDNGVLTAG
KTGTTQAYRDAWFVGFTGNYTCAVWFGNDDYTSTNEMTGGSLPAMTFKRAMDYAHQGVTL
RAIPGVENPLPSEKDLAKTVAAKPQDGLPQLIRPRMLSVQSTNILKDLGKKLKDAAPLAP
AKLASAE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggatccggacaaccctgaaaaagggcctgaaaacgagacagaaaagcaggccgct
gaccccggcaggcggccggcgaagagccgtcacattctgctgcgcatcgattcgtggatc
gattcgaccgtctggaacgccggcttccgcgccgccgagatctgggaagacaccactatc
ttcttccgccgtttccgcgtgcgcggctggaagcgcgtggtcttcgaactggccggcgaa
gggctgaccctcggcacggtcggcgcggtgctgatgctggtgcttgcccagccggccttc
gaagcgaccaaggaggactggcgcaaccgcggcgatttcgccgtcaccttcaccgaccgc
tacggcaacgtcatcggccatcgcggcgtcatccatcagaattcggtgccgatcgacgaa
ctgccggactccctgatcaaatcggtgctcgccaccgaagacaggcgcttcttcgaccat
tttggcatcgacgccatcggtctcttccgcgccatggtcaccaacgcccaggccggcgaa
gtcgtgcagggcggctcgacgctgacgcagcagctcgccaagaacctgttcctttccaac
gagcgttcgatcgaccgcaaggtcaccgaagccttcctggcgctatggctcgaggccaac
ctatccaagaaggaaatcctctccacctatctcgaccgcgcctatatgggcggcggcacg
tttggcgcggccgcggcggcgcagttttatttcggcaagaacatcaccgatgtgaacctt
gccgaatccgccatgctcgccggcctgttcaaggcgccggcgaaatatgcgccgcatgtc
aacctgccggcggcgcgtgcccgcgccaacgaagtgctgaccaacctcgtgcagagcggg
ctgatgaccgagggccaggtgatcgccgcccgacgcagcccagcgaccgtcgtcgaccgc
aacgaggtggaatcgcccgatttcttcctcgactgggccttcgacgaggtgcagcggctt
tcgccgcgtttccaccagcattcactgatcgtgcgcacgacgatcgacatgggcatccag
aaggcggccgaggattcggtcgagacgtcgctgcgcgaatatggcgaggcttaccacgcc
aagcagggcgccctggtgatgatcgaaaacggcggcgccgtgcgcgccatggtcggtggg
cgcgattacggcgaaagccagttcaaccgcgccaccagggcgctgcgccagccgggctcc
tccttcaaggtctatacctatgccctggcgatggagagcgggatgacgccgcagacgacg
atcgtcgacgcgccgatctactggggcaattggagcccgcataattacgccaaccgctat
gtcggacgcatcacgctcgagaccgcgatcgctcagtcgatcaacaccgtgccggtgcgg
ctcgccaaggagaagctcggcattcagccgatccgggcgatggcgaaaaacctcggtgtc
gaaacgccgatccgcgacgacgtcaccattccgatcggcacctccgaagtgactgtgctc
gaccaggcgacggcctatgccaccttcccggccggcggatatcagtcgcgccgccacggc
atcagccagatcctcgattacgagggcgatgtgctctatgatttcgaccgtgacgagccg
gcgcccaaacgcgtgctgtcggaacaggccgatgcctatatgaaccagatgctgtcgcgc
gtgccctatgtcggcaccgcgcgcaaggcagctctcgacaacggcgttttgaccgccggc
aagaccggcacgacccaggcctatcgcgacgcctggttcgtcggtttcaccggcaactac
acctgcgccgtctggttcggcaatgacgactacacctcgaccaatgagatgaccggcggc
tcgctgccggcgatgaccttcaagcgcgccatggactatgcccatcagggcgtgacgctg
cgcgccatccccggcgtggaaaaccccctgccctcagaaaaggacctcgccaagaccgtc
gccgccaagccgcaggacggattaccgcagctcatcaggccgcgcatgctttcggtacaa
tcgacgaatatcctcaaagacctcggcaaaaagctgaaggatgccgccccgctggcgccg
gcgaagctggcgagcgcggagtag
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