Rhizobium sp. Kim5: Kim5_CH01570
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Entry
Kim5_CH01570 CDS
T05501
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Kim5_CH01570 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhk03032
]
Kim5_CH01570 (dnaB)
Enzymes [BR:
rhk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Kim5_CH01570 (dnaB)
DNA replication proteins [BR:
rhk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Kim5_CH01570 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA
nSTAND3
AAA_24
RuvB_N
NACHT
SLFN-g3_helicase
AAA_22
ABC_tran
AAA_16
TsaE
NTPase_1
AAA_33
IstB_IS21
NB-ARC
IPT
AAA_5
RNA_helicase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ARQ57663
LinkDB
All DBs
Position
complement(1579515..1581011)
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AA seq
498 aa
AA seq
DB search
MNDAARKIAAVAPSEQHYREAPNNIEAEQALLGAILMNNDAYYRVSDFLKPIHLYEPLHR
KIFEVAGDIIRMGKIANPVTIKTFLKADEKVGDMTVSQYLASLVSNAVTVINAEDYGRAI
YDLALRRALITIGEDVVNIAYDAPLDMPPQSQIEDTERRLFELAENGRYDGGFQSFNDAV
ALAIDMAAVAKERDGGLSGISTGIHSLDAKMGGLQRSDLIILAGRPGMGKTSLATNIAYN
IAAAYEGEVQSDGSMKARNGGVVGFYSLEMSSEQLATRIISEQTEVSSSKIRRGDINDAD
FEKLVACSMMMQKVPLYIDQTGGISIAQLSARARRLKRQRGLDVLVVDYVQLMTGSGKSS
DNRVQEITQITTGLKALGKELNVPIIALSQLSRQVESRDDKRPQLSDLRESGSIEQDADV
VLFVFREEYYVKNQEPRDPHDPKYPEWEALFDKVKGTADVIIAKQRHGPTGTVKLAFQAE
FTRFADLADPSFIQYEEH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgccgctcgaaagattgcagctgttgctccctcggagcagcattatcgcgaa
gcacccaacaacatcgaagccgagcaggcgcttctgggtgcaatcctgatgaacaacgac
gcctattaccgggtgtcggatttcctcaagccgatccatctctacgaaccgctgcaccgg
aagatcttcgaggtcgccggcgacattatccgcatgggcaagatcgccaacccggtaacg
atcaagaccttcctcaaggccgacgaaaaggtcggcgacatgacggtttcacaatatctt
gcgagcctggtcagcaacgctgtcaccgtcatcaatgccgaggactacggaagggcgatc
tatgacctggcgctgcgccgggcgctgatcacgatcggcgaagacgtggtcaacatcgcc
tatgacgcaccgctcgacatgccgccgcagtcgcagatcgaggataccgaacgccgtctt
ttcgaactcgcggaaaacgggcgctatgacggtggcttccagtccttcaacgatgcggtg
gcgctggcgatcgacatggcggccgtcgccaaggaacgcgatggcggcctttccggcatt
tccaccggcatccactcgctggacgccaagatgggcggcctgcagcgttcggacttgatc
atcctcgccggacgcccgggcatgggcaagacctcgcttgccaccaacatcgcctacaat
atcgccgccgcctacgagggcgaggtgcagtcggatggcagcatgaaggccaggaatggc
ggcgtcgtcggcttctattcgttggaaatgtcgtccgaacagctcgccactcgtatcatc
tccgagcagacggaagtctcctcctcgaagatccgccgcggcgacatcaacgatgccgat
ttcgaaaagctcgtcgcctgctcgatgatgatgcagaaggtgccgctctatatcgaccag
accggcggtatctcgatcgcccagctttcggcacgcgcgcgccggctcaagcgccagcgc
ggcctcgacgtgctggtggtcgactacgtgcagctgatgaccggttcgggcaaatcgagc
gacaatcgcgtccaggaaatcacccagatcaccaccggcctgaaggcgctcggcaaggag
ctcaacgttccgatcatcgccctgtcgcagttgtcacgtcaggtcgaaagccgtgacgac
aagcggccgcagctttccgaccttcgtgaatccggttcgatcgagcaggacgccgacgtc
gtgctcttcgtgttccgcgaggaatattacgtcaagaaccaggagccgcgcgatccccac
gatccgaaatatccggaatgggaagcgctgttcgacaaggtgaagggcacggccgacgtc
atcatcgccaagcagcgccacgggccgacgggcacggtgaagctcgccttccaggcggaa
ttcacacgcttcgccgatctcgctgatccctccttcatccagtatgaagagcactga
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