Rhizobium sp. Kim5: Kim5_CH01636
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Entry
Kim5_CH01636 CDS
T05501
Name
(GenBank) L,D-transpeptidase domain-containing protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhk01002
]
Kim5_CH01636
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhk01011
]
Kim5_CH01636
Peptidases and inhibitors [BR:
rhk01002
]
Cysteine peptidases
Family C82
Kim5_CH01636
Peptidoglycan biosynthesis and degradation proteins [BR:
rhk01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Kim5_CH01636
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ARQ57729
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Position
1650889..1652193
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AA seq
434 aa
AA seq
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MSKKNGIEALSRRAFLASAATVGAGALAAGPALAQSALDGLLNAPRRGNWDDQFDAKAAS
RTATAIVSNTPILGPQSVASAQQAIMQYQQIAAAGGWPEVNPGDQRLQLGVSHPAVQALR
QRLAITGDLPREAGLSSAFDSYVDGAVKRFQARHGLPADGVLGEFTLKAMNIPADVRLQQ
LNTNIVRLQTFPEDLGRRHLMVNIPAAYVEAVEDGSVATRHTAVVGRLSRPTHLVNSKIY
EVILNPYWTAPRSIVEKDIMPLMRKDPTYLEKNAIRLIDGKGNEVAPETVDWNGEAPNLM
FRQDPGKINAMASTKINFYNKNGEYMHDTPQQGLFNKLMRFESSGCVRVQNVRDLTNWLL
RETPGWSRQQMEQVIASGVNTPIKLAAEVPVYFVYISAWGMPDGIVQFRDDIYQMDGNAE
LALDTTAGMEQPVQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaaaaacggaattgaagctctttcgcgccgcgctttcctggcgtcggcggca
acggttggcgccggcgcgcttgctgccggacctgcattggcgcaatcggcgctcgatggg
ctcctgaatgcgccgcgccgcggcaactgggacgaccagttcgacgccaaggcggcttcg
cgcacggcgaccgccatcgtttccaacacgccgatcctcggacctcaatcggtcgccagc
gcccagcaggcgatcatgcagtatcagcagatcgctgccgccggcggctggcctgaagtc
aatcccggcgaccagcgcctgcaactcggcgtcagccatcccgccgtccaggcgctgcgc
cagcgcctggcgatcaccggcgacctgccgcgcgaagccggcctgtcgagcgccttcgat
tcctatgtcgacggcgccgtcaagcgcttccaggcgcgtcacggcctgccggccgatggc
gttctcggcgaattcacgctgaaggcgatgaacatccccgccgatgtccgcctgcagcag
ctcaacaccaatatcgtccgtctgcagaccttccccgaagacttgggccgccgtcacctg
atggtcaacattccggctgcctatgtcgaggcggttgaagacggcagtgtcgcgacgcgt
cataccgcggttgtcggccgcttgagccgcccgacgcatcttgtcaattcgaagatctac
gaggtcatcctcaatccttactggacggcgccgcgctcgatcgtcgagaaagacatcatg
ccgctgatgcggaaggatccgacctatctcgaaaagaacgccatccgtctgatcgacggc
aagggcaacgaagtcgcccccgagaccgtcgactggaacggcgaggcgccgaacctgatg
ttccgtcaggaccccggcaagatcaatgccatggcatcgacgaagatcaacttctacaac
aagaacggcgagtacatgcacgacacgccgcagcagggcctgttcaacaagctgatgcgc
ttcgaatcctcgggctgcgtccgcgtccagaacgtgcgcgacctgacgaactggctgctg
cgcgagacccccggctggagccgccagcagatggagcaggtgatcgcaagcggcgtcaac
acgccgatcaagctcgcggcggaagttccggtctatttcgtctacatctccgcctggggc
atgcccgacggcatcgtccagttccgcgacgacatttatcagatggacggcaatgccgag
ctggcgctcgataccacggccggcatggaacagccggtgcaataa
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