Rhizobium sp. Kim5: Kim5_CH01637
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Entry
Kim5_CH01637 CDS
T05501
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00260
Glycine, serine and threonine metabolism
rhk00460
Cyanoamino acid metabolism
rhk00630
Glyoxylate and dicarboxylate metabolism
rhk00670
One carbon pool by folate
rhk00680
Methane metabolism
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01120
Microbial metabolism in diverse environments
rhk01200
Carbon metabolism
rhk01230
Biosynthesis of amino acids
rhk01240
Biosynthesis of cofactors
rhk04981
Folate transport and metabolism
Module
rhk_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Kim5_CH01637 (glyA)
09102 Energy metabolism
00680 Methane metabolism
Kim5_CH01637 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Kim5_CH01637 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
Kim5_CH01637 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
Kim5_CH01637 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
Kim5_CH01637 (glyA)
Enzymes [BR:
rhk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
Kim5_CH01637 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ARQ57730
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Position
1652409..1653707
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AA seq
432 aa
AA seq
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MTNASTESFFNRSLSDVDPEIFGAIGKELGRQRHEIELIASENIVSRAVLEAQGSIMTNK
YAEGYPGKRYYGGCQFVDIAEELAIERAKKLFGVNFVNVQPNSGSQMNQAVFLALLQPGD
TFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYGVREGDNLLDMDEVARKAEQHKPKLIIAG
GTAYSRIWDWKRFREIADSVGAYLMVDMAHIAGLVAGGQHPSPFPHCHVATTTTHKSLRG
PRGGVILTNEEDLAKKFNSAVFPGLQGGPLMHIIAAKAVAFGEALQPEFKEYAAQIVKNA
RALAETLIAGGLDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEK
PFVTSGVRLGAPAGTTRGFKEAEFREIGNLIVEVLDGLKVANSDEGNAAVEAAVRGKVVN
LTDRFPMYDYMG
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgcttccaccgaatccttcttcaatcgttcgctttcggacgtcgatcccgag
attttcggcgcgatcggaaaggaactcggtcgccaacggcacgagatcgaactgatcgct
tccgagaacatcgtttcccgcgccgtgctggaagcgcagggctccatcatgaccaacaaa
tatgccgagggttatccgggcaagcgctattacggcggctgccagttcgtcgatatcgcc
gaggagctggcgatcgaacgcgccaagaagctgttcggcgtcaatttcgtcaacgtccag
ccgaattccggctcgcagatgaaccaggccgtgttcctggcgctgctgcagcccggcgat
accttcatgggtctcgacctgaattcgggcggccacctcacgcatggttcgccggtcaac
atgtccggcaagtggttcaacgtcgtctcctacggcgtgcgtgaaggcgataacctgctc
gacatggatgaggtcgcccgcaaggccgaacagcacaagccgaagctgatcatcgccggc
ggcaccgcctattcccgcatctgggactggaagcgcttccgcgagatcgccgactcggtc
ggcgcctatctgatggtcgatatggcccacatcgccggtctcgtcgccggcggccagcat
ccctcgccgttcccgcattgccatgtcgcgacgacgacgacgcataagtcgctgcgcggt
ccgcgcggcggcgtgatcctcaccaatgaagaggatctggccaagaagttcaattcggcc
gtcttccccggtctgcagggtggcccgctgatgcacatcatcgccgccaaggcggtcgcc
ttcggcgaggcgctgcagcctgagttcaaggaatatgccgcccagatcgtcaagaacgcc
cgggcgctggccgaaacgctgatcgctggtggtctcgatgtcgtctccggcggcaccgac
aaccacctgatgctcgtcgacctgcgcaagaagaacgccaccggcaaacgcgccgaggcc
gctctcggccgcgcctacgtcacctgcaacaagaacggcattcccttcgacccggaaaag
cccttcgtcacctcgggcgtacgcctgggcgcgccggctggcaccacccgcggcttcaag
gaagccgaattccgcgaaatcggcaatctgatcgtcgaggttctcgacggcttgaaggtt
gccaattccgacgaaggcaatgccgctgtcgaagccgccgtgcgcggcaaagtggtcaac
ctcacagaccgcttcccaatgtatgactacatggggtaa
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