Rhizobium sp. Kim5: Kim5_CH01753
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Entry
Kim5_CH01753 CDS
T05501
Symbol
dinB-1
Name
(GenBank) DNA polymerase IV 1
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhk03400
]
Kim5_CH01753 (dinB-1)
Enzymes [BR:
rhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Kim5_CH01753 (dinB-1)
DNA repair and recombination proteins [BR:
rhk03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
Kim5_CH01753 (dinB-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
DNA_pol_lambd_f
HHH_5
POLH-Rev1_HhH
Cdd1
PRKCH_uORF2
DUF4332
Motif
Other DBs
NCBI-ProteinID:
ARQ57838
LinkDB
All DBs
Position
complement(1771068..1772357)
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AA seq
429 aa
AA seq
DB search
MTPAPDKTPGFCRDCLAEQKGEARRCISCGSPRLVRHRELHALTLAHIDCDAFYAAVEKR
DNPELADKPVIIGGGKRGVVSTACYIARIHGVRSAMPMFKALEACPQAVVIRPDMEKYVR
VGRQVRALMQDLTPLVQPLSIDEAFLELGGTERLHHDPPARTLAKFARRIETEIGITVSV
GLSYCKFLAKVASDLQKPRGFSVIGREEAVEFLAPRPVTTIWGVGKALAATLEADGIRTI
SQLQQMEENELMRRYGSIGQRLARLSRGIDDREVHLNDAAKSVSAETTFFDDISRHDDLV
PILRNLSEKVSWRLKKGDIAGRTVVLKMKSADFKTRTRNRRLEDPTQLADRIFRIGLELL
EKETDGTKFRLIGIGVTDLGDAARADPPDLIDRQSGRRAAAEAAMDKLRDKFGKGTVETG
YTFGSKRDH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgcccctgacaagacacccggcttttgtcgcgactgccttgccgagcagaag
ggtgaggcgcgccgttgcatatcctgcggcagtccgcgtctggtgcgccatcgcgagctc
catgcactgacgctggcgcatatcgattgcgacgccttctatgcggccgtcgagaagcgc
gacaatcccgagcttgccgacaagcccgtgatcatcggcggcggcaaacgcggcgtcgtc
tccactgcatgctacattgcccgcatccacggagtgcgctcggcgatgccgatgttcaag
gcgctggaggcatgcccacaggccgtcgtcatccgtcctgatatggagaaatatgtccgg
gtcgggcgccaggtacgggcgctgatgcaggatctgacgccgctggtgcagccgctgtcg
atcgacgaggcatttctggaacttggcggcaccgagcggctgcatcacgacccgccggcg
cgcacgctcgccaaattcgcccggcgcatcgaaacggagattggcatcaccgtctcggtc
gggctttcctattgcaaattcctcgccaaggtcgcctccgacctgcagaagccacgcggt
ttttccgtcatcggccgcgaagaagcggtcgaattcctggcgccgcgtcccgtcacgacg
atctggggtgtcggcaaggcccttgccgcgacgctggaagcggatggcatccgcaccatc
agccagttgcagcagatggaggagaacgagctgatgcgccgctacggcagcatcggccag
cggctcgcccgcctctcgcgcggcatcgacgaccgcgaggtgcatctcaatgatgccgcc
aagagcgtctcggccgagacgaccttcttcgacgacatctcgcgccacgacgatctggtg
ccgatcctgcgcaatctttccgaaaaggtctcctggcgcttgaagaaaggcgacatcgcc
ggccgcaccgtcgtgctgaagatgaagagcgccgacttcaagacgcgcacccgcaaccgc
aggctcgaggacccgacccagctggccgacaggatcttccggatcgggctcgagctgctc
gaaaaggagacggacggcacgaaattccgcctgatcggcatcggcgtcacggatctcggc
gacgccgcccgcgccgacccgcccgatctcatcgaccggcagtcgggccggcgggcagcg
gccgaagcggcgatggacaagctgcgcgacaagttcggcaagggcacggtcgagaccggc
tataccttcggcagcaagcgcgatcactga
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