Rhizobium sp. Kim5: Kim5_CH02221
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Entry
Kim5_CH02221 CDS
T05501
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhk03032
]
Kim5_CH02221 (gyrA)
03400 DNA repair and recombination proteins [BR:
rhk03400
]
Kim5_CH02221 (gyrA)
Enzymes [BR:
rhk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Kim5_CH02221 (gyrA)
DNA replication proteins [BR:
rhk03032
]
Prokaryotic type
DNA Topoisomerases
Kim5_CH02221 (gyrA)
DNA repair and recombination proteins [BR:
rhk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Kim5_CH02221 (gyrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CAP18_C
Motif
Other DBs
NCBI-ProteinID:
ARQ58275
LinkDB
All DBs
Position
2228428..2231250
Genome browser
AA seq
940 aa
AA seq
DB search
MTEQTPPGGGKLPPGIEPISIMEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGM
SELGIDWNKKYVKCARVTGDVMGKYHPHGNAAIYDALARMAQPWSLRLPLIDGQGNFGSV
DGDPPAAERYTECRLEKAAHSLLDDLDKETVDFRDNYDGTLSEPVVVPAKFPNLLVNGAG
GIAVGMATNIPPHNLSEVIDGCIALINDPAIELPELMQIIPGPDFPTGAKILGRAGIRSA
YETGRGSVIMRGVATIEPMRGDREQIIITEIPYQVNKATMIEKMAELVREKRIEGISDLR
DESDRQGYRVVIELKRDANAEVILNQLYRYTPLQTSFGCNMVALNGGKPEQLTLLDMLRA
FVTFREEVVSRRTKFLLRKARERAHVLVGLAIAVANIDEVIRVIRQAPDPQSAREELMTR
RWPAEDVESLIRLIDDPRHRINEDMTYNLSEEQARAILELRLARLTALGRDEIGDELNKI
GEEIRDYLDILSSRVRIQTIVKDELTAVRDEFGTPRRTEIVDGGLEMDDEDLIAREDMVV
TVSHLGYIKRVPLTTYRAQRRGGKGRSGMTTRDEDFVSRLFVVNTHTPVLFFSSRGIVYK
EKVWRLPIGTPTSRGKALINMLPLAPGERITTILPLPEDEASWDNLDVMFSTTRGTVRRN
KLSDFVQVNRNGKIAMKLEEEGDEILSVETCTEHDDVLLTTALGQCIRFSVDDVRVFAGR
NSIGVRGINLGEGDRIISMTIVGHVDAEPWERAAYLKRSAAERRATGVDEEDIALVGEEV
TEEGQLSDERYEELKAREQFVLTVSVKGFGKRSSSYDFRISGRGGKGIRATDTSKTGEIG
ELVAAFPVDDGDQIMLVSDGGQLIRVPVGGIRIASRATKGVTIFSTAKDEKVVSVERISE
PEEDETEEAVETAEGAPVAEEGSTGETPVADGDPAGTTEE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
ttgactgagcaaacaccccccggcggcgggaagctcccgccaggcatcgagcccatctcc
atcatggaggaaatgcagcggtcgtatctcgattacgcgatgagcgtcatcgtcagccgc
gcgctgcccgacgtgcgcgacggcctgaagcccgtgcaccggcgcatcctttacggcatg
tccgagctcggcatcgactggaacaagaaatacgtcaaatgcgcccgcgtcaccggcgac
gtgatgggtaaataccatccgcacggcaatgccgcgatctacgatgcgctcgcccgcatg
gcgcagccttggtcgctgcggctgccgctgatcgatggtcagggcaatttcggctccgtc
gacggcgatccgccggcggccgaacgttacaccgaatgccgcctggaaaaggccgcccat
tcgctgctcgatgatctcgacaaggaaaccgtcgacttccgcgacaactatgacggcacg
ctctccgagccggtggtggttcccgccaagttcccgaacctgctcgtcaacggcgccggc
ggcatcgccgtcggcatggcgaccaacattccgccgcataacctgtcggaagtgatcgac
ggctgtatcgcgctgatcaacgatccggcgatcgagctgccggaactgatgcagatcatt
cccggcccggattttccgacaggcgcaaagatcctcggtcgcgccggcatccgctcggct
tacgagaccggccgcggttccgtcatcatgcgcggtgtcgcgacgatcgagccgatgcgc
ggcgaccgtgagcagatcatcatcaccgaaatcccctatcaggtgaacaaggcgacgatg
atcgaaaagatggctgaactggtgcgcgaaaagcgcatcgagggcatctccgacctgcgc
gatgaatccgaccgccagggctatcgcgtcgtcatcgagctgaagcgcgacgccaatgct
gaggtcatccttaaccagctctaccgctatacgccgctgcagacctccttcggctgcaac
atggtggcgctgaacggcggtaagccggaacagctgacgctgctcgatatgctgcgagcc
ttcgtcaccttccgcgaagaagtcgttagccggagaacgaaattcctcctgcgcaaggcg
cgcgagcgcgcccatgtgttggtcggccttgccattgcggtggccaacatcgacgaagtc
atccgcgtcatccgccaggcgccggacccccagtcggcccgtgaagagctgatgacccgc
cgctggccggcagaagatgtcgaaagcctgatccgtctgatcgacgatccgcgccaccgc
atcaacgaggacatgacgtacaacctgtcggaagaacaggcccgcgccatcctcgaactg
cgtcttgcccgcctcacggccctcggccgtgacgaaatcggcgatgaactcaacaagatc
ggcgaggaaatccgggattatctcgatattctttcctcgcgtgtccgcatccagaccatc
gtcaaggatgagctcaccgctgtgcgcgacgagttcggcacaccgcgccgcaccgagatc
gtcgatggcggtctcgaaatggacgatgaggatctgatcgcccgcgaggacatggtcgtc
accgtctcgcatcttggttatatcaagcgcgtaccgctgaccacctaccgcgcccagcgc
cgtggcggcaagggtcgctccggcatgaccacccgcgacgaagatttcgttagccggcta
ttcgtagtcaatacccatacgccggttctgttcttctcctcgcgcggcatcgtctacaag
gagaaggtctggcgcctgccgatcggcacgccgacctcgcgcggcaaggcgctgatcaac
atgctgccgctcgcccccggcgagcgcatcaccaccatcctgcccttgcccgaggacgag
gcgagctgggacaatctcgacgtcatgttctcgacgacgcgcggcacggttcgccgcaac
aagctgtcggacttcgttcaggtcaaccgcaacggcaagatcgccatgaagctcgaggag
gagggcgatgagatcctctccgtcgagacttgcacggaacatgacgacgttctgctgacg
accgcgctcggccagtgcatccgcttctccgtcgacgacgttcgcgtcttcgccggccgc
aactcgatcggcgtgcgcggcatcaatctcggtgaaggcgatcgcatcatctcgatgacc
atcgtcggccatgttgatgccgagccgtgggagcgcgcagcctatctgaaacgctctgcc
gccgaacgtcgcgcgacgggcgtcgatgaagaggatatcgctctcgtcggcgaggaagtc
accgaagagggacagctctcggacgagcgttatgaagagctgaaggcacgcgagcagttc
gtgctcacggtctctgtgaagggcttcggcaagcgttcgtcgtcctacgatttccgcatc
tccggccgcggcggcaagggcatccgcgccaccgacacgtcgaagaccggcgaaatcggc
gaactggtcgccgccttcccggtcgatgacggcgatcagatcatgctggtttcggatggc
ggccagctgatccgggtgccggtcggcggcatccgcatcgccagccgcgccaccaagggc
gtcaccatcttctcgacggctaaggatgagaaggtcgtttccgtcgagcgcatcagcgag
ccggaagaggacgagacggaggaagccgtcgagaccgccgaaggtgctcctgttgctgag
gaaggttcaaccggcgagacgccggttgccgatggcgatcccgccgggaccaccgaggaa
tga
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