Rhizobium sp. Kim5: Kim5_CH02257
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Entry
Kim5_CH02257 CDS
T05501
Name
(GenBank) GGDEF/EAL domain-containing protein
Organism
rhk
Rhizobium sp. Kim5
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
CHASE
SLATT_1
Motif
Other DBs
NCBI-ProteinID:
ARQ58311
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Position
complement(2268258..2270513)
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AA seq
751 aa
AA seq
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MKFRRNTKTIRGLAGSLMSHASAFAPALFAAIIAAIVVWVATNWRLERSLANERSVVAGE
LATMSSRLQTNLNSNVKLLQGLAAGIAVDPAMGQNRFSKLAAQILQPDSQLRSFAAAPDM
VVQWVYPEKGNERAIGLDYRRNEKQRAAAMLARNTHNIVLTGPVELVQGGTAFVVRCPVY
IDDGNSQIFWGLLSGIIDIPRLYRDSGLSSTDLEIAISTTPEPNSPKQVFFGSLETFEKK
PVVASVDMTYGRWSLAALPRHGWGQNNGMGTFELYASLLALCVVAPIVWVGFLTKSRQKT
IEKLRLHKSKLVRARQRLEHLSLHDALTGLPNRRFVDQMISQPPRPDPQDRLILIHIDLD
RFKEINDTKGHAGGDMVLQTTASRLAEMTGPNDVAARIGGDEFVFASWSSDPEPKATELA
RQIVDALQQTIFIDGAGYVVGASVGVAWERARDRDLGQLLLNADLALYEAKKAGRGRAAV
FTEELRSAAIHSKELADDFNQALDRDELVAFFQPQFNAVTLDIAGVEALARWNHPRKGVL
GPDKFLDAAEKLGRTGEMDRLILQKALFELTRWDGLGMQIPRVSVNISARRLAQPSLLTE
LSELPIARGRLCFELLETISFDDLQPALSEIIPTIKALGIEIEIDDFGTEHASIVSLLRF
EPRRLKIDREIIKPIIASPSQRRLVSSIIEIGRSQNIDIVAEGVETMEHAKILKDLGCHL
LQGYALARPMTSDQLIEFCRMKGKGTAKASR
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttcgaagaaacacaaagacaattcgtggcctcgctggttccctgatgagccat
gcgagcgcatttgctccggcactatttgcggccattatcgcagccatcgtcgtctgggtg
gcaacgaactggcggcttgagcgatcgttggccaacgagcgctcggttgttgccggcgag
cttgcgacgatgtcatctcggcttcagaccaacctcaatagcaatgtgaagctgttgcaa
ggtttggcggcgggtatcgcggtcgatccggcgatgggccagaacagattttccaaactt
gccgcgcagattctgcagccggattcacaattgcgaagcttcgctgctgcgcccgacatg
gtggtccagtgggtctatccggaaaaaggaaacgaaagggccatcggactcgactaccga
agaaatgagaagcaacgggccgccgcgatgctggcgcgcaacacacacaatatcgtcctg
acaggcccggtggagcttgtccaaggcggaacggctttcgttgtcaggtgcccggtctat
atcgacgatggaaacagccagatcttttggggtctgctttccggcatcatcgatattccg
aggctataccgggatagcggtcttagttcgaccgacctggagatcgccatcagcacgacg
ccggagccgaactcgcccaaacaggtcttttttggcagcctggaaacctttgagaagaaa
ccggtcgtggcctccgtcgatatgacttacggccgatggtccctcgccgcactgcccagg
catggatgggggcagaataacggcatgggcacttttgagctctatgccagtctgttggcc
ttgtgtgtcgtcgcgccgatcgtctgggtcggctttctgaccaaatcgcgccagaagacc
atcgaaaaattgcgccttcacaagagcaagctcgtacgagcacgacagaggctggagcac
ctgtcactgcatgacgccctcaccgggctacccaatcggcggtttgtcgaccagatgatc
tcgcagccgccgaggcccgatccgcaagaccgcctgatcctcatccatatcgacctcgac
cgctttaaagagatcaacgacacgaaggggcacgccggcggcgacatggtcctgcaaaca
acggcttcgcggcttgccgaaatgaccggccccaacgatgtcgcggcgcgcatcggcgga
gacgagttcgtcttcgccagctggagcagcgatcccgagcccaaagcaaccgaattggcc
aggcagattgtcgacgcactgcagcagaccatctttatcgatggagccggttatgtggtc
ggcgcaagcgtcggtgtcgcctgggaacgggctcgcgaccgggacctcggtcagttgctt
ctgaatgccgatctggctctgtacgaggcgaagaaagccggccgcggccgcgcggccgtt
ttcaccgaagagctccgcagcgccgcaatccattcaaaagaattggcggatgacttcaat
caggcgctcgatcgcgacgaactcgtcgcattcttccagccgcagtttaacgcggtcacg
cttgatatcgcaggcgtcgaggcgctcgcccgctggaaccacccgcgaaagggtgtgctc
ggacccgacaaattccttgacgccgcggaaaagctggggcgcaccggcgagatggatcgg
ctgatcctgcaaaaggcgctgttcgagctgacgagatgggacggcttgggaatgcaaatt
ccgcgggtctccgtcaatatttcagcgcgccgcctggcgcagccgagcctgcttaccgaa
ctgtcggagcttcccatagcgagaggccgtctgtgtttcgagctgctcgagacgatctct
ttcgacgatcttcaacctgccctcagcgagatcattccgacgatcaaggcgctcggcatt
gaaatcgagatcgacgatttcggcacggaacatgccagcatcgtcagcttgcttcgattt
gagccgcgcagacttaagatcgatcgagaaatcatcaagccgatcatcgcctccccctcg
caacgccgtctggtctcctccatcatcgaaatcggccggtcgcaaaacatcgacatcgtt
gccgagggcgtggagacaatggagcatgcgaagatcctgaaagatctcggttgccatttg
ctgcaaggttacgccctggcccgacccatgacctcggatcagttgatcgaattttgccgg
atgaagggcaagggaacggcaaaggcaagccgatag
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