Rhizobium sp. Kim5: Kim5_CH02385
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Entry
Kim5_CH02385 CDS
T05501
Symbol
csd
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00450
Selenocompound metabolism
rhk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Kim5_CH02385 (csd)
Enzymes [BR:
rhk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Kim5_CH02385 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Kim5_CH02385 (csd)
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GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
SelA
Motif
Other DBs
NCBI-ProteinID:
ARQ58435
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Position
complement(2391146..2392387)
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AA seq
413 aa
AA seq
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MDKIVPATQYDVEAIRRDFPILAEKVHGKPLVYLDNGASAQKPQSVIDAISHAYAHEYAN
VHRGLHYLSNAATDAYEAAREKVRRFLNAPSVNDIVFTKNSTEAINTVAYGWGMPKLGEG
DEIVLTIMEHHSNIVPWHFIRERQGAKLVWVPVDDEGAFHIEDFEKSLTERTKLVAITHM
SNALGTIVPVKEVCRIAHERGIPVLIDGSQGAVHLPVDVQDIDCDWYVMTGHKLYGPSGI
GVLYGKKERLAQMRPFQGGGEMIFEVAEDAVTYNDPPHRFEAGTPPIVQAIGLGYALDYM
EKVGREAIARHEADLASYAVERLKSVNSLRMFGTAPDKGSIFSFELAGIHAHDVSMVIDR
QGIAVRAGTHCAMPLLKRFGVTSTCRASFGMYNTRAEVDALADALEYARKFFA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcgtgccggccacgcaatacgacgtcgaagccatccgccgggattttccg
atcctggcggagaaggtgcacggcaagccgctggtctatctcgacaatggcgcctcggcc
cagaagccgcagtcggtgatcgacgcgatctcgcatgcctacgcccatgaatacgccaac
gtgcatcgcggtcttcactatctctccaatgccgcgaccgatgcctatgaggcggcgcgc
gaaaaggtccgccgtttcctcaacgccccgtcggtcaacgacatcgtcttcaccaagaat
tcgacggaagcgatcaacaccgtcgcctatggctggggcatgcccaagctcggcgaaggt
gacgagatcgtcctgacgatcatggagcaccactccaacatcgtgccctggcatttcatt
cgcgagcggcagggcgccaaactggtctgggtgccggtggacgacgagggcgccttccat
atcgaggatttcgaaaagagcctgacggagcgcaccaagctcgtcgccatcacccatatg
tcgaatgcgctcggcacgatcgtccccgtcaaggaagtctgccgcatcgcccatgaacgc
ggcattccggtcttgatcgacggcagccagggcgccgtgcacctgcccgttgacgttcag
gatatcgattgcgactggtacgtcatgaccggccacaagctctacggcccgtcgggcatc
ggcgttctctacggcaagaaggaacggcttgcccagatgcgtcctttccagggcggcggc
gagatgatcttcgaggtcgccgaggatgcggtcacctacaacgatccgccgcatcgcttc
gaggccggcacgccgccgatcgtccaggcgatcgggctcggttatgcgctcgactatatg
gagaaggtcggccgcgaggcgattgcccggcatgaagccgatcttgcctcttatgctgtg
gaacggctgaaatcggtcaattcactgcgcatgttcggaacggcgcccgacaagggcagt
atcttttccttcgagcttgccggcatccacgcccacgacgtctcgatggtgatcgaccga
cagggcattgcggtgcgcgccggcacgcattgcgccatgccgctcttgaaacgcttcggc
gtcacctccacatgccgtgcatccttcggcatgtacaatacccgcgccgaggtcgatgcc
ctggccgatgcgcttgaatatgcgcgcaagttctttgcttga
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