Rhizobium sp. Kim5: Kim5_CH03106
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Entry
Kim5_CH03106 CDS
T05501
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Kim5_CH03106
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_CH03106
Transporters [BR:
rhk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Kim5_CH03106
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ARQ59139
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Position
3124050..3125153
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AA seq
367 aa
AA seq
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MISNISRLLSLSTAIIVASTAIAAAEPSAELIAAAKKEGTLTTIALPHSWCGYGDVIAGF
KAKYGIEVNELNPDASSGDEIEAIKANKGNTGPQAPDVIDVGLSFGPSAKKDGLIQPYKV
STWDSIPDSAKDAEGYWYGDYYGVLAFLVNKDLVKESPADWPDLKKSDYANSVALAGDPR
SANQAVQGVYAAGLSASGGDAAKAGEEGLKFFAELNKNGNFVPVVGKAAPFAQGSTPIII
AWDYNAMSWGESLKGNPPFEVVVPKTGVVAGVYVQAISAFAPHPNAAKLWMEYLYSDEGQ
LGWLKGYCHPIRFNDLAKNNKIPKELLDKLPPAAAYEKAVFPTLEEQAAGKETITKNWDS
VVGANVK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgatctctaacatttctcgactgctgtcgctttctactgcgatcatcgtggcttcgacc
gcgattgccgcagctgaaccgagcgcagaacttatcgccgctgccaagaaggaaggcacg
ctgaccacgatcgctcttccgcacagctggtgcggctatggcgacgttatcgccggcttc
aaggccaagtacggtatcgaagtcaacgagttgaatccggacgcaagctcgggcgacgaa
atcgaagctatcaaggccaataagggcaacaccggcccgcaggcccccgatgtcatcgac
gtcggcctctccttcggcccgtccgccaagaaagacggcctgatccagccttacaaggtt
tctacctgggattcgatcccggatagtgccaaggatgccgaaggctactggtacggcgac
tattacggcgttctcgcgttccttgtgaacaaggacctcgtcaaggaatcgccggccgac
tggccagatctgaagaagagcgattatgcaaacagcgtcgcgctcgcaggcgatccgcgc
agcgccaaccaggctgttcagggcgtttatgcagctggcctctccgcatccggcggtgac
gcggccaaggcgggcgaagagggtctgaagttcttcgccgagctcaacaagaacggcaat
ttcgtacctgtcgtcggcaaggctgcgcccttcgcacagggctccacgccgatcatcatc
gcctgggactacaatgcgatgtcctggggtgaaagcctgaagggcaatcctccgttcgaa
gtcgtcgttccgaagacgggcgtcgtcgccggcgtttacgtccaggcaatctccgccttc
gctccgcacccgaatgctgccaagctctggatggaatatctctattccgacgaaggtcag
ctcggttggctgaagggctattgccacccgatccgcttcaacgatcttgccaagaataac
aagatcccgaaggaactgctcgacaagctgccgccggcagcagcctatgaaaaggctgtc
ttcccgacgctcgaagagcaggccgccggcaaggaaaccatcaccaagaactgggatagc
gtcgtcggcgccaacgttaagtaa
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