Rhizobium sp. Kim5: Kim5_CH03109
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Entry
Kim5_CH03109 CDS
T05501
Symbol
potA-1
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein PotA 1
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Kim5_CH03109 (potA-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_CH03109 (potA-1)
Transporters [BR:
rhk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Kim5_CH03109 (potA-1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
ABC_ATPase
AAA
AAA_22
ORC-CDC6-like
Rad17
NB-ARC
AAA_25
AAA_14
AAA_23
RsgA_GTPase
AAA_28
sCache_3_2
Rop
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ARQ59142
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Position
3126916..3127977
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AA seq
353 aa
AA seq
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MSFLTLNNLQKSFGPVQVVQNFNMNIEKGEFISFLGPSGCGKTTVLRMIAGFETPTGGTL
TINGKDQSALKPNQRNIGMVFQAYALFPNMSVRDNVAFGLKVAGAPKPEIDARVKEMLGL
IKLDHLADRYPYQLSGGQQQRVALARALAVKPQVLLLDEPLSALDAKIRVSLREEIRQIQ
QQLGITTVFVTHDQEEALSISDRIVVMNAGKADQIGSPFEIYNKPATRFVASFVGTLNLI
EAQVVDPDANLIQIGDQKITLKQSVAAHKAGETISLALRPEAGSLSDTARSDTALTGQVV
SAHFLGSVIRTRMNVGGNVISFDMFNSPGVTPPQAGETVTLRFMAADLLVIRD
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttctcacactgaacaacctccagaaatccttcggcccggtccaggtggtccag
aatttcaacatgaacattgagaagggcgaattcatctccttcctcgggccgtcgggctgc
ggcaagacgaccgtgctgcgcatgatcgccggcttcgaaacgccgaccggcggcacgctg
actatcaacggcaaggaccagagtgcgctgaagccgaaccagcgcaatatcggcatggtc
ttccaggcctatgcgctattccccaacatgtccgtacgcgacaacgtcgccttcggcctc
aaggtcgctggcgccccgaagccggaaatcgacgcccgcgtcaaggaaatgctcggcctg
atcaagctcgatcacctggccgaccgctatccctaccagctgtcaggcggccagcagcag
cgcgtcgcacttgcccgcgcgctagctgtcaagccgcaggtgctgctgctcgacgagccg
ctgtcggccctcgacgccaagatccgcgtgtcgctgcgcgaggagatccgccagatccag
caacagctcggcatcaccacggttttcgtcacccacgatcaggaagaggcgctgtcgatc
tccgatcgtatcgtcgtgatgaacgccggcaaggccgaccagatcggatcgcccttcgag
atctacaacaagccggcaacgcgcttcgtcgcctctttcgtcggcacgctgaaccttatc
gaggcccaggtcgttgatcccgacgctaacctcatccagatcggcgatcagaagatcaca
ctgaagcagtcggtcgcagcccacaaggccggcgaaaccatctcgctggcgctgcgcccg
gaagcgggctcgctctccgacaccgccagaagcgatacggcgctgaccggccaggtcgtc
tcggcccacttcctgggctcggttatccgaacccgcatgaatgtcggcggtaacgtcatc
tccttcgacatgttcaacagccccggcgtcaccccgccgcaggccggcgaaacggtgacg
ctgcgcttcatggcggctgatctgctggtcatccgcgactga
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