Rhizobium sp. Kim5: Kim5_CH03127
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Entry
Kim5_CH03127 CDS
T05501
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Kim5_CH03127
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_CH03127
Transporters [BR:
rhk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Kim5_CH03127
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ARQ59160
LinkDB
All DBs
Position
complement(3145973..3147271)
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AA seq
432 aa
AA seq
DB search
MTTETTPTKAAKGLSRRTLLKTGAAAVGAIAGSGAITGFPTIWAKTNITLRQFGTGVSNI
NAIAEKCKADLGITLEMTATDSDAAAQRAVTQPDSYDIADIEYWIAKKVFPTGVLQPMDV
KKLKYYDKIVPLFINGKMKPDSVIAQGTAPHTVGFVEAQGAKKFAKEPTQWMTMVPTIYN
ADTLGIRPDLVGRDITSWADIMDPKFKGKTSILNIPSIGIMDAAMIMEAMGNIKYADKGN
MTKEEIDKTIEFLIKAKGDGQFRAFWKSFDESVNLMASGEVVIQSMWSPAVAAVRSKGIA
CKYQPLKEGYRAWGGGLGLASHLKGAELDAAYEYINWYTSGWVGGYLNRQGYYSACMETA
KNFMTADEWGYWIEGKPAQGDILSPEGKVMEKAGAVRDGGAFEARMGAVACWNSVMDEDR
YMVRRWNEFIAA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgaaaccacaccgaccaaggctgcgaagggcctgtcccgccgcacgctcctg
aagacgggcgctgccgccgtcggcgccatcgccggctccggcgccatcaccggctttccc
accatctgggcgaagacgaatatcacgcttcgccagttcggcaccggtgtttcgaacatc
aatgccatcgccgagaagtgcaaagccgatcttggcatcacgctggagatgacggcaacc
gattccgacgccgccgcccagcgcgccgtcacccagcccgacagctacgacatcgccgac
attgaatactggatcgccaagaaggtattcccgacaggcgtgctgcagccgatggacgtc
aagaagctcaaatattacgacaagatcgtgccgctcttcatcaacggcaagatgaagccg
gacagcgtcattgcccagggcacggcgccgcacacggtcggcttcgtcgaggcgcagggc
gccaagaagttcgccaaggaaccgacgcagtggatgacgatggttccgacaatctacaac
gccgatacgctcggtatccgcccggatctcgtcggccgcgacatcaccagctgggccgat
atcatggacccgaagttcaagggcaagacctcgatcctcaacatcccgtcgatcggcatc
atggacgcggcgatgatcatggaagccatgggcaacattaaatatgccgacaagggcaac
atgaccaaggaagagatcgacaagacgatcgaattcctgatcaaggccaagggcgacggc
cagttccgcgccttctggaagagcttcgacgagtcggtcaacctgatggcttcgggagaa
gtcgtcatccagtccatgtggtcgccggctgtcgccgccgtccgctccaagggcatcgcc
tgcaagtatcagccgctgaaggaaggctaccgcgcctggggcggcggcctcggccttgcc
tcgcacctcaagggcgccgagctcgatgcggcctatgaatatatcaactggtacacgtcg
ggctgggtcggcggctacctcaaccgccagggctattattccgcctgcatggagaccgcc
aagaacttcatgaccgcagacgaatggggttactggatcgaaggcaagccggcgcagggc
gacatcctctcacccgagggcaaggtcatggaaaaggccggagccgtccgcgacggcggc
gccttcgaagcccgcatgggggctgtggcctgctggaactccgtcatggacgaagaccgc
tacatggtccgccgctggaacgagttcatcgcggcgtaa
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