Rhizobium sp. Kim5: Kim5_CH03713
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Entry
Kim5_CH03713 CDS
T05501
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Kim5_CH03713
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_CH03713
Transporters [BR:
rhk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Kim5_CH03713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
AAA
Mg_chelatase
AAA_29
SRP54
Rad17
TOBE_2
AAA_25
AAA_30
AAA_16
AAA_23
AAA_19
AAA_5
AAA_27
nSTAND_NTPase5
PRK
AAA_14
NACHT
nSTAND1
TsaE
RsgA_GTPase
RNA_helicase
AAA_28
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
ARQ59726
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Position
3738438..3739463
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AA seq
341 aa
AA seq
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MSDAYLELDKLTLAYGDTVAVKDLDLAIGKGELLALLGPSGCGKTTTMRAIAGLLTPASG
RIGLDGADITRVSANKRAIGLVFQSYALFPHLTVYENVAFGLRLKGISGADLDARVGAGL
KSVGLAAFAGRKPAELSGGQQQRVALARSMVMEPKVLLLDEPLSNLDARLRLEMRAELQR
VQRETGVTMIFVTHDQVEALALADRIVVMLNGGIEQIGTPEEIYNNPASAFVADFVGFEN
VFALKDGKLATPNGPVALPAPPPQTAAGLAWRPSAVVLGSGSFAGTVRGTSFAGNSREYL
LDTPLGPIKAEIDASLPPYRIGSPLTFDLPIAGAANLKRFG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcctatctcgaactcgacaagctgacgcttgcctatggcgatacggtcgcg
gtgaaggatctcgatcttgcgatcggcaagggcgagctcctcgcgctcctcggcccctcc
ggctgcggcaagacgacgacgatgcgcgccattgccggcctgctgacgcccgcctccggc
cgcatcggcctcgacggcgccgatattacccgcgtctccgccaacaagcgcgccatcggc
ctcgtcttccaatcctacgcgctctttccgcatttgaccgtctatgagaatgtcgctttc
ggcctgcgtctcaaaggcatctcgggcgccgatcttgacgcccgcgtcggcgccggcctg
aaatccgtcggcctcgccgctttcgccggccgcaagcccgccgaactctccggcggccag
cagcagcgcgtggcgctcgcccgctcgatggtaatggagccgaaagtcctgctgctcgac
gagccgctctccaatctcgacgcccggcttcgcctggagatgcgcgccgaattgcagcgc
gtccagagggagaccggcgtcaccatgatcttcgtcacccacgaccaggtggaggccctg
gcgctcgcggaccgcatcgtcgtcatgctgaacggcggcatcgagcagatcggcacgccg
gaggagatctacaacaacccggcctccgccttcgtcgccgatttcgtcggcttcgagaat
gtcttcgcgctgaaggatggaaagcttgcgacgccgaacggcccggtcgcgctgcccgcc
ccgccgccgcaaacggcggcgggcctggcctggcgtccgagcgcggtggtcctcggctcg
ggttcctttgctggaacggtgcgcggcacctcttttgccggcaacagccgcgaatatctc
ctcgatacgccgcttgggccgatcaaggccgagatcgatgcaagcctgccgccatacagg
atcggcagcccgctcaccttcgatctgccgatagccggcgcggccaacctcaaacggttc
gggtga
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