Rhizobium sp. Kim5: Kim5_CH03957
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Entry
Kim5_CH03957 CDS
T05501
Symbol
soxA-1
Name
(GenBank) sarcosine oxidase alpha subunit SoxA 1
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00260
Glycine, serine and threonine metabolism
rhk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Kim5_CH03957 (soxA-1)
Enzymes [BR:
rhk01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Kim5_CH03957 (soxA-1)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Kim5_CH03957 (soxA-1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
DAO
NAD_binding_8
GIDA
AlaDh_PNT_C
HI0933_like
Thi4
Pyr_redox_3
FAD_binding_3
Pyr_redox
Lycopene_cycl
3HCDH_N
Fer2_BFD
Motif
Other DBs
NCBI-ProteinID:
ARQ59962
LinkDB
All DBs
Position
complement(3994963..3997956)
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AA seq
997 aa
AA seq
DB search
MSGVNRIAGKGRLTPAKTARFSFDGKSYTGLEGDSVASALIAHGVHLLGRSFKYHRPRGI
LSAGAEEPNALIDVARDAARKQPNVRATVQEVFDGMIVSSQNRWPSLARDVGAINNLMSP
FFAAGFYYKTFMWPRAAWKHVYEPLIRRAAGLGVAPTEGDPDHYASRYAHCDVLVVGGGV
AGLSAALAAARTGVKVILCDEQPEAGGALRYDAGAKIDGQDGFTWAQKTVAQLKAMDNVQ
VLLRTTAFGYYNHNFVGLAERVTDHLANPPHDLPRERLWQVRAKRVILANGAIERHMVFP
NNDRPGIMLASAARTYLNHYGVAVGKNVGIYTAHDSAYEAAFDLKRAGVSIAAIVDCRQA
PGAAVLAEARALGIDVLAGQSVINTAGRLRISSMTVARNGGGSPRKIAVDALLVSAGWTP
SVHLFSQSRGKVAFDAESQRFLPGSYAQDCLSVGACNGTDDLQQTIEESLAAGELMAQAT
GGSSGEKIAMSAEQAFEWTGGMIGAAEGAGPKTNAKAFIDFQHDVCAKDIRLAVREGMHS
IEHIKRFTTNGMASDQGKLSNMHGLAIAAEMLGKEIPQVGLTTFRAPYTPVTYGTLVGHS
RGELFDPTRKTPLHGWEEAHGAVFEDVGNWKRAWFYPRAGENMHQAVARECRTARESAGI
FDASTLGKIEVVGPDAAKFLNLIYTNAWDTLKPGKARYGIMTREDGFVYDDGVVGRLAED
RFHVTTTTGGAPRVLHHMEDYLQTEFPDLKVWLTSVTEQWAVIAVQGPKARAIVEPLVEG
VDLSNEAFPHMSVAECTVCGVPARLFRVSFTGEIGFEINVPADYGQSVLEAVWANAEPLG
ACVYGTETMHVLRAEKGYIIVGQDTDGTVTPDDAGVAWAVSKKKKDFVGIRGLQRPDLVK
EGRKQLVGLITKDPKLVLEEGAQVVANPNEPKPMTMLGHVTSAYWSENCGRSIAFALVAG
GRARMGETLYVPMPDRTIAVEVTDLVFFDKEGGRIHG
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgtcaaccgtatcgccggcaaggggcgcctgacgccggccaaaaccgcgcgc
ttcagcttcgacggcaagagctacacggggctggaaggcgatagcgtcgcctcggcgctg
atcgcccacggcgtgcatcttctgggacgttcgttcaaatatcaccggccgcgcggcatt
ctttcagccggcgcggaggaaccgaacgccctgatcgacgtcgctcgggatgcagcacgc
aagcagccgaacgtgcgcgccactgtgcaggaagtcttcgacggcatgatcgtcagctcg
cagaatcgctggccctcgcttgcccgcgatgtcggggcgatcaacaatctgatgtcgccg
ttctttgcggccggcttctactacaagaccttcatgtggccgcgtgccgcctggaagcac
gtctatgaaccgctcatccgtcgcgccgccggcctcggtgttgcgccgacggaaggcgat
ccggaccattatgccagccgttacgcgcattgcgacgtgctggtggtcggcggcggcgtt
gccgggctttcggcggcgctggccgcggcccggaccggcgtcaaggtgatcctctgcgac
gagcagccggaagcgggcggtgcgctgcgctatgatgccggcgccaagatcgacgggcag
gacggcttcacctgggcgcagaagaccgtggcgcagctgaaggcgatggacaatgtccaa
gtgctgctgcgcacgacggctttcggctactacaaccacaatttcgtcggccttgcagag
cgcgtcaccgaccatctcgccaatcccccccatgatctgccgcgcgaacggctctggcag
gtccgcgccaagcgggtgatcctcgccaacggcgcgatcgaacggcacatggtgtttccg
aacaacgaccggccgggcatcatgctggcctcggcggcgcggacctatctcaaccattac
ggcgtcgccgtcggcaagaatgtcggcatctacacggcgcatgactccgcctatgaagcg
gccttcgatctgaaacgagcaggtgtctcgatcgctgcgatcgtcgattgccggcaggcg
ccgggtgcggcggtattggcggaggcacgtgcgctcggcatcgacgtgctggctggccag
tcggtcatcaataccgccgggcggctgcgcatctcgtcgatgacggtggcacgcaacggc
ggcggttcgccgcgcaagatcgccgtcgatgcgctgctggtttcggccggctggacaccg
tccgtgcatctgttctcgcagtcgcgcggcaaagtggccttcgacgctgagagccagcgt
ttcctgcccggctcctacgcgcaggactgcctgtcggtcggcgcctgcaacggcaccgac
gacctgcagcagacgatcgaggaatcgcttgccgccggcgagctgatggcgcaggccacc
ggcggaagcagcggcgagaagatcgcaatgtcggccgagcaggcgtttgaatggacaggc
ggcatgatcggtgccgccgaaggcgccgggccgaaaaccaacgccaaggctttcatcgac
ttccagcacgatgtctgtgccaaggatatccgccttgccgtgcgcgagggcatgcattcg
atcgagcacatcaagcgctttacgaccaacggcatggcctcggaccagggcaagctttcc
aacatgcatggcctggcgatcgccgccgaaatgctcggcaaggaaattccgcaggtcggt
ctcaccaccttccgcgccccctacacgccggtcacttacggcacgctggtcggccattcg
cgcggagagttgttcgatcccacgcgcaagacgccgctgcatggctgggaagaagcccac
ggcgccgtttttgaagatgtcggcaactggaaacgcgcctggttctatccgcgtgccggc
gagaacatgcatcaggcggtcgcgcgcgaatgccgcacagcccgagagtcggccggtatt
ttcgacgcttcgacacttggcaagatcgaggtagtggggccggatgcggcgaagttcctc
aacctcatctacaccaatgcctgggatacactgaagccgggcaaggcccgctacggcatc
atgacccgcgaagacggcttcgtttatgacgacggtgtcgtcgggcgactggccgaggac
cgtttccatgtcacgacgacgaccggcggagcgccgcgcgttcttcaccacatggaagat
tacctgcagacggaattcccggacctgaaggtatggctgacctcggtcaccgagcaatgg
gccgtcattgccgtgcagggaccgaaggcgcgcgcgatcgtcgagccgctggtcgaaggg
gtcgacctttcaaacgaggccttcccgcatatgagcgttgccgaatgcacggtctgcggt
gtgccggcgcggctcttccgcgtctccttcaccggcgaaatcggcttcgaaatcaacgtg
ccggccgattatggccagtcggtgctcgaagccgtctgggccaatgccgagccgctcggc
gcctgcgtctacggtaccgagacgatgcacgttctgcgcgccgaaaagggctacatcatc
gtcggccaggatactgacgggacggttactcccgacgatgcgggtgttgcctgggccgtt
tcgaagaagaagaaggactttgtcggcattcgcggcctgcagcggccggacctcgtaaag
gagggacgcaagcagcttgtcgggcttatcaccaaggatccgaagctggtgcttgaggaa
ggcgcgcaggtcgtcgcgaacccgaacgagccgaagccgatgacgatgctcggccacgtc
acctcggcctactggtcggaaaactgcggccggtcgattgccttcgcgctcgtcgccggc
ggccgggcgcggatgggtgagacgctctacgtgccgatgccggaccggacgatcgccgtc
gaggtgacggatctggtgttctttgacaaggaaggaggccgcatccatggctga
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