Rhizobium sp. Kim5: Kim5_CH03976
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Entry
Kim5_CH03976 CDS
T05501
Name
(GenBank) TRAP dicarboxylate transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Kim5_CH03976
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_CH03976
Transporters [BR:
rhk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Kim5_CH03976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
UCR_Fe-S_N
Motif
Other DBs
NCBI-ProteinID:
ARQ59981
LinkDB
All DBs
Position
complement(4018681..4019787)
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AA seq
368 aa
AA seq
DB search
MDRRSFFKKAGTAGAGAVAATALAAPAIAQENPKIAWRMTSSFPKSLDTIYGGAEDIAKH
VAAATDGNFTIQPFAAGEVVPGLQAVDAVAAGTVEAAHTTSYYFVGKDPTYAIGTAIPFG
LNSRLTNAWFNDGNGNKLMNEFYATQGMYALPAGNTGAQMGGWFRKEINTLDDLKGVKMR
IAGLAGRVMEKVGVIPQQIAGGDIYPALEKGTIDAAEFVGPYDDLKLGFHKVAKYYYYPG
WWEGGPTVHAFFNLDKWSNLPKHYQAALTDACAFANTNMLAKYDTKNPTALKQLVAEGAT
LRPFSQEIMEACFQAAMGIYGEISANNQYFKKIYDDQTAFKRDAYLWMQLSEYTFDTFMM
IQQRAGKL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtcgttcgtttttcaagaaggcgggaaccgccggggccggcgcggttgccgca
acggcattggcagcgcctgcgatcgcgcaggagaatccgaagatcgcgtggcgcatgacg
tcgtcatttccgaagagcttggacacgatctatggcggtgccgaagacatcgccaagcat
gtcgccgccgcaacggacggcaatttcaccatccagcctttcgcggccggtgaagtcgtg
ccgggacttcaggccgtcgatgcggtggctgccggtacggtcgaggcagcccacaccacc
tcctattatttcgtcggaaaggatccgacctacgccatcggaacggccattccgttcggg
ctcaacagccgcctgaccaatgcctggtttaatgacggcaacggcaacaagctgatgaac
gagttttatgccacgcagggcatgtatgctttgccggccggcaataccggtgcccagatg
ggcggctggttccgcaaggaaatcaacacgctcgacgacctcaagggcgtcaagatgcgc
atcgccggccttgccggccgcgtcatggagaaggtcggcgtcatcccgcagcagatcgcc
ggcggcgacatctatccggcgctcgaaaagggcacgatcgatgcggcggaattcgtcggt
ccctatgacgatctgaagctcggcttccacaaggtggcgaaatattactattatccgggc
tggtgggaaggcggcccgacggtgcatgcgttcttcaacctcgacaaatggagcaacctg
ccgaagcactaccaggcagcgctcaccgacgcctgcgccttcgccaacaccaacatgctg
gcgaaatacgacacgaagaacccgacggcgctgaagcagctcgtggccgaaggcgcaacg
ctgcgtccgtttagccaggaaatcatggaagcctgcttccaggcggctatgggcatttac
ggcgaaatctcggccaacaaccagtatttcaagaagatctacgacgatcagaccgccttc
aagcgcgacgcctatctgtggatgcagctttcggaatacaccttcgatacgttcatgatg
atccagcagcgggccggcaagctctga
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