Rhizobium sp. Kim5: Kim5_CH04020
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Entry
Kim5_CH04020 CDS
T05501
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Kim5_CH04020 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhk01007
]
Kim5_CH04020 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhk03016
]
Kim5_CH04020 (lysS)
Enzymes [BR:
rhk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Kim5_CH04020 (lysS)
Amino acid related enzymes [BR:
rhk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Kim5_CH04020 (lysS)
Transfer RNA biogenesis [BR:
rhk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Kim5_CH04020 (lysS)
Prokaryotic type
Other AARSs
Kim5_CH04020 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ARQ60024
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All DBs
Position
4063733..4065229
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AA seq
498 aa
AA seq
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MADNKTENTLSSDATEVRAQKLKLLREQIGDVYPAHFHRTMTNAELTAKYENLEPDAETQ
DVVTVAGRVYSSRNSGMFMDIHDASGKIQIFSHKDVTGEEARALLPMIDIGDIIGVSGVV
RRTKRGELTINAQKIEMLTKSLLPMPEKWHGLSDIELRYRKRHLDIMTNEDSKLRFQQRS
KIVSGIRRFMENDGFMEIETPMLQSIYGGATAEPFKTHHNTLKLDMYLRIAPELFLKRTL
VSGLTDKVFEINRNFRNEGVSTRHNPEFTMMECYWAYADYEDMMDLVERLFETLALSIHG
TTEFDFGDKRLSFKGPFKRVPMPDAVKQATGIDFLAIKTDEEARAAAKAAGFAVEKDWTW
GECLASIFEEKVEATLIQPSHVIHFPKDISPFAKEVPGEPRLVERFETYCNAWELGNAFS
ELNDPEEQRRRMVEQLEQAHARGEKEKQLDEEFLDAIDQGMPPAGGLGIGVDRLIMLLTN
APSIRDVILFPARRSKAD
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacaacaagaccgaaaacactctttcctccgacgcgaccgaagtgcgcgcccag
aagctgaagctgctgcgcgaacagatcggcgacgtctatccggcgcatttccaccggacg
atgaccaatgccgagctgactgcgaaatacgagaacctagagccggatgccgagacgcag
gatgtggtcaccgtcgccggccgcgtctattcctcgcgcaattccggcatgttcatggat
atccatgacgcctccggcaagatccagatcttctcgcacaaggacgtcaccggcgaggaa
gcccgcgccctgctgccgatgatcgacatcggcgacatcatcggcgtcagcggcgtcgtg
cgccgcaccaagcgcggcgagctaacgatcaacgcccagaagatcgaaatgctgaccaag
tcgctgctgccgatgccggaaaagtggcatggcctttccgacatcgagctgcgttatcgc
aagcgccatctcgacatcatgaccaacgaggattcgaagctgcgtttccagcagcgctcg
aagatcgtctccggcatccgccgtttcatggaaaatgacggcttcatggaaatcgagacg
ccgatgctgcaatcgatctatggcggcgcaaccgccgagccgttcaagacgcatcacaac
acgctgaagctcgacatgtatctgcgcatcgcgccggaactgttcctgaagcgcacgctg
gtttcagggttgaccgacaaggtcttcgagatcaaccgcaacttccgcaacgaaggcgtc
tccacccggcacaatccggaattcaccatgatggagtgttactgggcctatgccgattac
gaggacatgatggacctcgtcgagcggctattcgagaccctggcgctctccattcacggc
acgacggaattcgacttcggcgacaagcggttgtccttcaagggaccgttcaagcgcgtg
ccgatgcccgatgccgtcaaacaagcgaccggcatcgatttcctggcgatcaagaccgac
gaggaagcgcgcgccgccgccaaggctgccggcttcgcggtcgaaaaggattggacctgg
ggcgaatgccttgcctccattttcgaggaaaaggtcgaagccacgctgatccagccgtcg
catgtcatccatttcccgaaggacatctcgcccttcgccaaggaagtgccgggcgagccg
cgcctggtcgagcgcttcgaaacctattgcaacgcctgggaactcggcaacgccttctcg
gaactcaacgatcccgaagagcagcgccgccgcatggttgagcagctcgaacaggcgcat
gcccgcggcgaaaaggaaaagcagctggacgaggaattcctcgatgcgatcgaccagggc
atgccaccggccggcggcctcggcatcggcgtcgaccgcctcatcatgctgctgaccaat
gcaccgtcgatccgcgacgtcattctcttcccggcccgccgcagcaaggccgactga
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