Rhizobium sp. Kim5: Kim5_CH04133
Help
Entry
Kim5_CH04133 CDS
T05501
Name
(GenBank) HhH-GPD domain-containing protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Kim5_CH04133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhk03400
]
Kim5_CH04133
Enzymes [BR:
rhk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Kim5_CH04133
DNA repair and recombination proteins [BR:
rhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Kim5_CH04133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ARQ60126
LinkDB
All DBs
Position
complement(4181915..4182586)
Genome browser
AA seq
223 aa
AA seq
DB search
MVLNHWGREVQIIRNDDDVRLGLEVLLRLDPRLAPIAADVGPLPLRLREPGFAGLAHIIV
SQMVSRASAEAIWRRMLPADGPLTAEAYLLFHPEAWREFGLSRAKADTLTRIAEAVASGG
LDLSGLCLKPPGEALGELTGLKGVGPWTAEVYLMFCGGHADVFPAGDVALQNAVGAALGL
AARPQAKALAKLSEVWSPWRSVAARLFWAYYATKMRRDMVPVG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
ttggttttgaaccactgggggcgcgaggtgcagatcattcgcaacgacgatgacgtcagg
ctggggctcgaagtgctgcttcgcctcgatccgcgcctcgcaccgatcgcagcggatgtt
ggcccgcttccgctgcgactgcgcgagcccggatttgccggccttgcccatatcatcgtg
tcgcaaatggtctcgcgtgccagcgccgaggcgatctggcggcgcatgctgccggcggac
ggtccgctcacggcggaagcttacctgctgtttcaccccgaggcatggcgggaattcggc
ctgtcgcgcgccaaggccgatacgctgacgcggatcgctgaagcggttgcctccggcggc
ctcgatctttccgggctctgcctgaagccgccgggcgaagcgcttggcgaactgacgggg
ctgaagggcgtaggcccgtggacggcggaggtctatctgatgttctgcggcggccatgcc
gatgtctttccggccggcgatgtcgcgctgcagaacgccgtcggcgcggcgctcggactt
gcggcgcggccgcaagcgaaggcgcttgccaagctttcggaagtctggtcgccgtggcgc
tcggtggcagcccggcttttctgggcctattacgccacgaaaatgcgtcgtgacatggtg
ccagtcggctga
DBGET
integrated database retrieval system
