KEGG   Rhizobium sp. Kim5: Kim5_CH04147
Entry
Kim5_CH04147      CDS       T05501                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk00300  Lysine biosynthesis
rhk00470  D-Amino acid metabolism
rhk01100  Metabolic pathways
rhk01110  Biosynthesis of secondary metabolites
rhk01120  Microbial metabolism in diverse environments
rhk01230  Biosynthesis of amino acids
Module
rhk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Kim5_CH04147 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Kim5_CH04147 (lysA)
Enzymes [BR:rhk01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Kim5_CH04147 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ARQ60139
LinkDB
Position
4192869..4194137
AA seq 422 aa
MNHFEYRDGILHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA
IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHTIDHVDIGGGL
GVPYKDDNNPPPLPDAYAAIVKNQLRDLNCKVITEPGRLIVGNAGILVTEVLYVKDSGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLLAVSTAGAYGAVQAGTYNSRLLVPEVLVKGSDFHAIRPRRTYAELISLDSVPAW
LD
NT seq 1269 nt   +upstreamnt  +downstreamnt
gtgaaccatttcgagtaccgcgacggcatccttcacgccgagaacgttcccgttcccgag
atcgccaaggcggtcggcacgccgttctacgtctattccaccgcaaccctggaacgccat
taccgggtcttctccgaagccttcgccgatatggactcgatggtctgttacgcgatgaag
gcgaactcgaaccaggcggtgctgaagacgctgggtcgactcggcgccggcatcgacgtc
gtctcggaaggggagctgcgccgcgcactcgcagccgacattccggcaagccgcatcatg
ttttcaggcgtcggcaaaaccccgtcggagatggatttcgcgctcgaggccggcatctac
tgcttcaacgtcgaatccgaacccgagctcgaaatcctcaaccagcgcgccgtcagcgcc
ggaaagaaggctcccgtctccttccgcatcaacccggatgtcgacgcaaagacgcattcg
aagatctcgaccggcaagaaggaaaacaagttcggcatctcctgggagcgcgcccgcgcg
atctacgcccacgccgccaagctgcccggcatcgaggtcaccggcatcgacatgcatatc
ggcagccagatcaccgagctgcagcctttcgacgacgctttcaagctgctgcgcgacctt
gtcgcgacgctccgcgccgatggccacacgatcgatcacgtcgatatcggcggcggcctc
ggtgtcccctataaggacgacaacaatccgccgccgctgccggatgcctatgcggcgatc
gtcaagaaccagctgcgcgatctgaattgcaaggtcatcaccgagcccggccgcctgatc
gtcggcaatgccggaatcctcgtgaccgaggtgctttatgtgaaggacagcggcgaaaag
accttcgtcatcgtcgacggcgcgatgaatgatctcattcgcccgaccctctacgaggcc
tatcacgaaatccgcccggtgacgatttcggcagcgaacgcgccgcgcatccgcgccgac
gtcgtcggccccgtttgcgagaccggcgactatctggcgctcgaccgcgaaatggcgatg
ccgaagcccggtgatctgctggccgtcagcacggccggcgcctacggcgccgtccaggcc
ggcacctataacagccgcttgctggtccccgaagtcctggtcaagggcagcgatttccat
gcgatacgaccgcgtagaacctatgccgagctgatcagtctcgactccgttcccgcctgg
ctcgactaa

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