Rhizobium sp. Kim5: Kim5_CH04254
Help
Entry
Kim5_CH04254 CDS
T05501
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00020
Citrate cycle (TCA cycle)
rhk00190
Oxidative phosphorylation
rhk00650
Butanoate metabolism
rhk00720
Other carbon fixation pathways
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01120
Microbial metabolism in diverse environments
rhk01200
Carbon metabolism
Module
rhk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhk_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Kim5_CH04254 (sdhB)
00650 Butanoate metabolism
Kim5_CH04254 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
Kim5_CH04254 (sdhB)
00720 Other carbon fixation pathways
Kim5_CH04254 (sdhB)
Enzymes [BR:
rhk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Kim5_CH04254 (sdhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Fer4_7
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ARQ60245
LinkDB
All DBs
Position
complement(4304710..4305489)
Genome browser
AA seq
259 aa
AA seq
DB search
MVELALPKNSQMREGKVWPKPAGATNTREFRVYRWSPDDGQNPSIDTFYIDVDDCGPMVL
DGLLYIKNKIDPTLTLRRSCREGICGSCAMNIDGTNTLACTKGLDDIKGAVKVYPLPHMP
VVKDLVPDLSNFYAQHRSIEPWLKTVSPTPAKEWKQSHEDRQKLDGLYECILCACCSTSC
PSYWWNGDRYLGPAVLLQAYRWLIDSRDEATGERLDDLEDPFRLYRCHTIMNCAQTCPKG
LNPAKAIAEIKKMMVERRV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggttgaactcgctctccccaagaattctcagatgcgcgaaggcaaggtctggccgaag
ccggcgggtgcgacgaacacccgcgagttccgcgtctaccgctggagcccggatgacggc
cagaacccgtcgatcgacaccttctacatcgatgtcgacgattgcggtccgatggtgctc
gacggcctgctctacatcaagaacaagatcgacccgaccctgacgctgcgccggtcctgt
cgcgaaggcatctgcggctcgtgcgcgatgaatatcgacggcacgaacacgcttgcctgc
accaagggtctcgacgatatcaagggcgcggtgaaggtctatccgctgccgcatatgcct
gttgtcaaggatcttgtgcccgatctgagcaacttctatgcccagcatcgctcgatcgag
ccctggctgaagacggtgtcgccgacgccggccaaggaatggaagcagagccatgaggac
cggcagaagctcgacggtctttacgaatgcattctttgcgcctgctgttcgacctcctgt
ccgagctactggtggaacggcgaccgttatctcggcccggccgtcctgctgcaggcctat
cgctggctgatcgattccagagacgaggcgaccggcgaacgcctcgacgatctcgaagat
ccgttccgcctttatcgctgccacacgatcatgaattgcgcgcagacctgccccaagggg
ctcaatccggccaaggcaatcgccgaaatcaaaaagatgatggtcgagcgccgggtctga
DBGET
integrated database retrieval system
