Rhizobium sp. Kim5: Kim5_CH04255
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Entry
Kim5_CH04255 CDS
T05501
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00020
Citrate cycle (TCA cycle)
rhk00190
Oxidative phosphorylation
rhk00650
Butanoate metabolism
rhk00720
Other carbon fixation pathways
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01120
Microbial metabolism in diverse environments
rhk01200
Carbon metabolism
Module
rhk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhk_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Kim5_CH04255 (sdhA)
00650 Butanoate metabolism
Kim5_CH04255 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
Kim5_CH04255 (sdhA)
00720 Other carbon fixation pathways
Kim5_CH04255 (sdhA)
Enzymes [BR:
rhk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Kim5_CH04255 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
FAD_binding_3
FAD_oxidored
HI0933_like
GMC_oxred_N
Motif
Other DBs
NCBI-ProteinID:
ARQ60246
LinkDB
All DBs
Position
complement(4305508..4307349)
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AA seq
613 aa
AA seq
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MAPTSPAQNGKAYQYVDHSYDVIVVGAGGAGLRATLGMAEQGFRTACITKVFPTRSHTVA
AQGGIAASLRNMTPDSWQWHLYDTVKGSDWLGDVDAMQYLTMEAPKAVYELEHYGVPFSR
NEEGKIYQRPFGGHMQNYGEGPPVQRTCAVADRTGHAILHTLYGQSLRNNAEFFIEYFAL
DLIMSEDGSRCIGVVAWCLDDGTIHRFAAKMVVLATGGYGRAYFSATSAHTCTGDGGGMV
ARAGLPLQDMEFVQFHPTGIYGSGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASR
DVVSRCMTLEIREGRGVGKNKDHIFLHLDHLDPAVLHERLPGISESAKIFAGVDVTREPI
PVLPTVHYNMGGIPTNYWGEVLNADSANPERIIPGLMAVGEAGCASVHGANRLGSNSLID
LVVFGRAAAIRAGEVIDRAAPIPHLNVSACDKIMDRFDRLRYAGGGTPTAELREKMQRAM
QEDAAVFRTQESLESGCRRISAIWQEMRDIKVTDRSMVWNSDLVETLELQNLMANAITTI
YGAEARKESRGSHAREDYTEGAFAGRDDVNWRKHTLAWVNEAGDVKLDYRPVHTELIAEG
IDPYKIEPKARVY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgacttcacccgcccagaatggcaaggcctaccaatatgtcgatcactcctat
gacgtgatcgtcgttggcgccggcggcgctggcttgcgcgcgacactcggcatggccgag
cagggtttccgcaccgcctgcatcaccaaggttttcccgacccgttcgcacacggtcgcg
gcccagggcggcatcgccgcctcgctgcgcaacatgacgccggacagctggcaatggcac
ctttacgacacggtcaagggttccgactggctcggcgacgtcgacgccatgcagtatctc
accatggaagcgcccaaggcggtctatgagctcgagcattacggcgtgccgttctcgcgc
aacgaggaaggcaagatctatcagcgcccgttcggcggccacatgcagaattacggcgaa
ggcccgccggtgcagcgcacctgcgccgtcgccgaccgtaccggccacgccatcctgcac
acgctctacggccagtcgctgcgcaacaatgccgaattcttcatcgagtattttgcgctc
gacctgatcatgtcggaagacggcagccgctgcatcggcgtcgtcgcctggtgcctcgat
gacggcacgatccatcgcttcgccgccaagatggtggtgctggcgaccggcggctacggc
cgcgcctatttctcggcgacctctgcccatacctgcaccggcgacggcggcggcatggtg
gcgcgcgccggcctgccgctgcaggatatggaattcgtgcagttccacccgaccggcatc
tacggttcgggctgtctgatcaccgagggcgcacgcggcgaaggcggctacctcgtcaac
tccgagggcgaacgcttcatggagcgttatgcgccttcggccaaggaccttgcctcgcgc
gacgtggtttcgcgctgcatgacgctggagatccgcgaaggccgcggcgtcggcaagaac
aaggaccacatcttcctgcatctcgaccacctcgatccggccgttctgcatgaacgactg
ccggggatttccgagagcgccaagatcttcgctggcgtcgacgtcacacgcgagccgatc
ccggtcctgccgactgtccattacaatatgggcggcattcccaccaactattggggcgaa
gtgctgaacgccgacagcgccaatccggagcggatcattcccggcttgatggcggtgggt
gaggcaggctgcgcttcggtgcacggcgccaaccgcctcggctccaactcgctgatcgac
ctcgtggtcttcggccgggctgctgcgatccgcgccggcgaggtgatcgaccgcgcagcg
ccgatcccgcatctgaacgtttcggcctgcgacaagatcatggaccgcttcgaccgtctg
cgctatgccggcggcggcacgccgacggctgagctgcgcgaaaagatgcagcgcgccatg
caggaagacgcggccgtcttccgcacgcaggagtcgctggaatccggctgccggcgcatt
tcggcgatctggcaggaaatgcgtgacatcaaggtcaccgaccgctcgatggtctggaac
tcggatctggtggaaacgctggagctgcagaacctgatggccaacgccatcacgacgatc
tatggcgccgaggcccgcaaggagagccgcggttcgcatgcccgcgaggattataccgag
ggcgcattcgccggccgcgacgacgtcaactggcgcaagcatacgcttgcctgggtcaac
gaggcgggcgacgtgaaactcgactatcgccctgtgcacaccgagctgatcgccgagggc
atcgatccgtataagatcgagccgaaggcccgcgtctactga
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