Rhizobium sp. Kim5: Kim5_CH04257
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Entry
Kim5_CH04257 CDS
T05501
Symbol
sdhC
Name
(GenBank) succinate dehydrogenase cytochrome b556 subunit
KO
K00241
succinate dehydrogenase cytochrome b subunit
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00020
Citrate cycle (TCA cycle)
rhk00190
Oxidative phosphorylation
rhk00650
Butanoate metabolism
rhk00720
Other carbon fixation pathways
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01120
Microbial metabolism in diverse environments
rhk01200
Carbon metabolism
Module
rhk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhk_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Kim5_CH04257 (sdhC)
00650 Butanoate metabolism
Kim5_CH04257 (sdhC)
09102 Energy metabolism
00190 Oxidative phosphorylation
Kim5_CH04257 (sdhC)
00720 Other carbon fixation pathways
Kim5_CH04257 (sdhC)
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Gene cluster
GFIT
Motif
Pfam:
Sdh_cyt
DUF3313
Fumarate_red_D
Motif
Other DBs
NCBI-ProteinID:
ARQ60248
LinkDB
All DBs
Position
complement(4307748..4308143)
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AA seq
131 aa
AA seq
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MANVTNNRPLSPHLQIYKPIPTMVMSIVHRITGGALYVGTLLVAWWLIAAASGQASYDWA
NWVLGSLLGKLVLLGYTWALLHHMLGGFRHLMWDLGYGFEKEVSTKLAIANVIGSLCLTV
LVWVIGLLIRF
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtgacaaataaccggcccctatcgccgcatctgcaaatttataaacctatt
cccaccatggtcatgtcgatcgttcaccgcattaccggcggtgcgctctatgtcggcacg
ctgctcgtcgcctggtggctgatcgcggcggcaagcggccaagcgtcgtatgattgggcc
aactgggtgctcggcagccttctcggcaagctcgtgctgcttggctacacctgggcatta
ctgcaccacatgctcggcggtttccgccacctcatgtgggacctcggctatggtttcgag
aaggaagtctcgaccaagctcgccatcgccaacgtcatcgggtcgctctgtctgaccgta
ctggtctgggtgatcggcctcctcattcgcttctga
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