Rhizobium sp. Kim5: Kim5_CH04265
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Entry
Kim5_CH04265 CDS
T05501
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00860
Porphyrin metabolism
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01120
Microbial metabolism in diverse environments
rhk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Kim5_CH04265 (hemD)
Enzymes [BR:
rhk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
Kim5_CH04265 (hemD)
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Motif
Pfam:
HEM4
DUF374
Motif
Other DBs
NCBI-ProteinID:
ARQ60256
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Position
4313547..4314254
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AA seq
235 aa
AA seq
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MRVLVTRPAHSAEKTAQRLRDMGHEPLLLPLRRPQHDSSAAASALAATRGAIAVTSAEAM
RVLSALGETLGPHLDRPIFAVGETTAQAARRLGFRTVTASSGNGRDLADLVGAQSVEDLL
YLAGRPRAETFEGRLRELGIRFSVAECYRMLPVAPGPADIKAIFSGHRLDAVLFYSRQTA
EDFFQLAELRSALSEQGGIRLLCLSEAVAQAIPASLKETVAISSMPDEISLLSLL
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgctcgtcacccgccccgcacattcggccgagaaaaccgctcaacgtctgcgc
gacatgggccacgagccgctgctactgccactgcgtcggccacaacatgacagttccgca
gccgccagcgcgcttgccgccacccgcggagcgatcgcggtgaccagcgccgaagccatg
agggtcctgtcggctctcggcgagacacttggtccgcacctagaccgcccgatttttgcg
gtcggcgagacgacggcgcaagcggcgcggcgccttggcttccgaaccgtcaccgcatct
tcgggcaacggccgcgatctcgccgatctcgtcggcgcccaaagcgtggaggacttgctt
tacctcgccggcaggccgcgcgcagaaaccttcgaaggcagattgcgcgaactcggcatc
cgcttttccgtcgccgaatgttatcgcatgctgccggtcgctcccggcccggccgacatc
aaggcgattttttccggccatcgcctggatgccgttctgttctattcccggcagacggcc
gaggatttctttcagctggcagagctgcgatcggctttgtcggaacagggcggaatccgc
cttctctgcctcagcgaggcggtagcgcaggcgattccggcctccctgaaagagactgtg
gcgatttcctcgatgccggatgagataagccttttgtcgctgctttga
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