KEGG   Rhizobium sp. Kim5: Kim5_CH04392
Entry
Kim5_CH04392      CDS       T05501                                 
Symbol
rpoH-2
Name
(GenBank) RNA polymerase sigma-32 factor RpoH 2
  KO
K03089  RNA polymerase sigma-32 factor
Organism
rhk  Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhk03021]
    Kim5_CH04392 (rpoH-2)
Transcription machinery [BR:rhk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Kim5_CH04392 (rpoH-2)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 KORA HTH_23 Sigma70_r3 HTH_3 HTH_10 RNase_E_G GerE HTH_25
Other DBs
NCBI-ProteinID: ARQ60380
LinkDB
Position
4445893..4446756
AA seq 287 aa
MKNMSADRRMIKIAMAAPYLARQEEHDLATRWKDHDDRGARNQIAMAHMRLVISMAGKFR
NFGLPMSDLVQEGYVGLLEAAARFEPERDVRFSTYASWWIRASIQDYILRNWSIVRGGTS
SAQKALFFNLRRLRAKLAKGDTQLTLQSIHQEIAAALGVSLADVQTMDARLSGNDASLQA
PSVSGDAESAEKMDFLVSDDPLPDEQVSNMIDGERRRVWLASALKHLNEREMKIISARRL
AEDGATLEELGADLGISKERVRQIESRAMEKLRTALVSADPHMAAYA
NT seq 864 nt   +upstreamnt  +downstreamnt
atgaagaacatgtctgcagatcggcgcatgatcaaaatcgcgatggctgccccctatctc
gcccgccaggaagagcacgatctcgccacccgctggaaggatcatgacgatcgcggggcg
cgcaaccagatcgcgatggcgcatatgcgcctagtgatctccatggccggcaaattccgc
aatttcggtctgccgatgagcgacctcgtacaggagggctatgtcggcttgctggaggcg
gccgcgcgtttcgaaccggaacgcgatgtgcgcttctcgacctatgcgagctggtggatc
cgggcgtcgatccaagattatatcctgcgcaactggtcgatcgtgcgcggcggcacgagt
tcagcgcagaaggcgctgttcttcaatctgcgtcgcctgcgcgccaaactcgccaagggc
gacacacaactgacgctccaatccatccatcaggaaattgccgcggcgctgggcgtcagc
cttgccgacgttcagactatggatgccaggctttccggcaacgacgcttcgctgcaggcg
ccttccgtctccggcgatgctgagagcgcggaaaagatggattttctcgtcagcgacgat
ccgctgcccgacgaacaggtttccaacatgatcgacggcgagcgccgccgcgtctggctc
gcctcggcgttgaaacatctcaacgaacgcgaaatgaagatcatcagcgcccggcgtctg
gccgaagacggcgccacgctcgaagagctcggtgccgatctcggcatttccaaggagcgt
gtgcgccagatcgaaagccgggcgatggaaaaacttcgtaccgcgctggtgagcgccgac
ccgcatatggcggcctacgcatag

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