KEGG   Rhizobium sp. Kim5: Kim5_PA00123
Entry
Kim5_PA00123      CDS       T05501                                 
Name
(GenBank) type III secretion system HrcJ/YscJ/FliF family lipoprotein
  KO
K03222  type III secretion protein J
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Kim5_PA00123
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhk02044]
    Kim5_PA00123
Secretion system [BR:rhk02044]
 Type III secretion system
  Type III secretion core apparatus
   Kim5_PA00123
SSDB
Motif
Pfam: YscJ_FliF
Other DBs
NCBI-ProteinID: ARQ60596
LinkDB
Position
pRetKim5a:92872..93693
AA seq 273 aa
MITSALARSPITSPARKVLPKAAMLAFCLFLAACSQDVLTGLDQRDALDAQVLLERAGIS
VTMRSEKGGTYAIAAESADHARAIELLAGAGLPRQSFENVAELFPGNGFLVTPYEQKARM
SYAIEQQLAETLSGLDGVATARVHVVLPEENGRGLIKEKARAAAVLQYRPGANLNEIDMK
SRSVLVNSIRDLSYEDVSVVVSPWSEVGAPAAPPATAASAPAATVTPAPAAAPFSMVQSA
LSAFKAPNLAVIGAIILAIGACLLLLLPQRKER
NT seq 822 nt   +upstreamnt  +downstreamnt
atgatcacatcggcccttgcgagatcaccgatcacttcgcccgcgcgcaaagtccttccg
aaggccgccatgctcgctttctgcctgttcctcgccgcctgcagccaggacgtgctgacg
ggactcgatcagcgcgatgcgctggatgctcaggtcctgctcgaacgcgccggcatctcc
gtcaccatgaggagcgaaaagggcgggacctatgcgatcgccgctgaatcagccgatcat
gcccgggcgatcgagttgctggcgggcgccggtctgccgcgtcagtcgttcgaaaatgtc
gccgaactctttcccggcaacggcttccttgtgacgccttacgaacaaaaagcccggatg
agctacgccatcgagcagcagcttgccgaaacgctttcggggcttgacggcgtggcgacg
gcgcgcgtccatgtggtgctgccggaggaaaacggccgcgggctcatcaaggaaaaggcg
agggcggcggccgtgttgcaatatcgccccggcgccaatctcaacgagatcgacatgaaa
agccggtccgttctggtcaacagcatccgtgatctctcttacgaagatgtctcggtggtg
gtcagcccctggtcggaggtcggcgcgccggcggccccgccggcaacggcagcatcggcc
ccggcggcaaccgtgacgccggcacccgccgcagcgccattctcgatggtgcaaagcgct
ctctcggctttcaaggcccccaatctggccgtgatcggcgcaattatcctcgccatcggg
gcatgcctgctgctgctgttgccgcagcggaaggagcgctga

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