KEGG   Rhizobium sp. Kim5: Kim5_PA00133
Entry
Kim5_PA00133      CDS       T05501                                 
Name
(GenBank) type III secretion system FHIPEP family protein
  KO
K03230  type III secretion protein V
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Kim5_PA00133
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhk02044]
    Kim5_PA00133
Secretion system [BR:rhk02044]
 Type III secretion system
  Type III secretion core apparatus
   Kim5_PA00133
SSDB
Motif
Pfam: FHIPEP HAD
Other DBs
NCBI-ProteinID: ARQ60606
LinkDB
Position
pRetKim5a:complement(100823..102754)
AA seq 643 aa
MKVRSSAFAMLAQRTDMLLAVFFASVVTMLVLPLPTIVLDVLIAFNLSFAFVVLITTTYL
KSVLEISTFPAVILIGTLFRLALTISSTRLVLADADAGEIIMAFGDFVVAGNVVVGLIIF
LIVALVQFIVVTKGAERIAEVGARFTLDAMPGKQLAIDSDLRNGHISTEAAQKRRSRLEQ
ESQFFGAMDGAMRFVKGDAVAGLVIVAVNLIGGLAIGIFQKGLSFAEAAHLYTLLSIGDG
LVSQIPSILMAVSAGIVVTRVSDDGNGSLGSDIGRELFREPRALAIAAALTICAGFVPGF
PTGVLGAIGLCLAGLAFMVHRRRAGPAAAASANAVESANSYPLDRTKYGDPVIATVAVET
LARLEAMRLGEMLDGRIRMAARAVGVSVTVPTFNADPRMAEDLIHLQVENVPAGLVSCGP
ERTAEQIADGIVRIVRRHIGALFSVDDAAQWLGSLEPRLGKLAIDVATQVPLMLTVAVVR
RLLDSGVTLSQPRGLLEVMLHAGTDHAPDALAEMARAALVKQIAFGLLDRRGLLPALVLP
AEWDHFIRSYDAAGATEKIEIAERLRLLAEKARQALEDANERGYDPIIIVPGEWRLLTQT
LMIHHNCRIPVLAAEEIDRDITIETIGEIGQIRNAAGSKQRPG
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgaaggtaaggtcatccgccttcgccatgcttgcgcagcgcaccgatatgctgcttgcg
gtttttttcgcctccgtcgtgacgatgctggtgctgccgcttccgacaatcgttctggac
gtgctgatcgctttcaatctctccttcgctttcgtggtgctgatcaccacgacctatctg
aagagcgtgcttgaaatctcgacctttcccgcggtcattctgatcggcacgctgttccgc
ctggccttgacgatttcctcgacccggctcgtgctggcggacgccgatgccggcgagatc
atcatggccttcggcgatttcgtcgttgcgggaaatgtcgtcgtcgggctgatcattttc
ctgatcgtggcgctggtgcagttcatcgtggtgacgaagggcgccgagcgcatcgccgag
gtcggcgcccgtttcacgctcgacgccatgccgggcaagcagctcgccatcgacagcgac
ctgcgcaacggccatatcagcacggaagccgcgcagaagcgccggtcgcgtctcgaacag
gagagccagttcttcggcgcgatggacggcgccatgcgcttcgtcaagggcgatgcggtc
gcaggattggtgatcgtcgccgtcaatctcatcggcggcctggcgatcggtatcttccag
aagggcctgagcttcgccgaggccgcccatctctatacgctgctgtcgatcggcgacggt
ctggtgtcgcagattccgtccattctgatggcagtctcggccggtatcgtcgtgacccgc
gtgtccgatgacggcaacggcagtctcggcagcgatatcggccgcgaactcttccgggag
ccccgtgcattggcgattgcggcggcgctgacgatctgcgcgggcttcgtgccgggattt
cccacaggcgtgctcggcgcgatcggcctgtgtctggcgggccttgccttcatggtgcat
cgccggcgcgccggcccagccgcggccgcatcggcgaatgccgtggaaagcgccaattcc
tatccgctcgacaggacgaaatatggcgatcccgtcatcgccaccgtcgcggtggaaacg
ctggcgcggcttgaggcgatgcgactcggcgaaatgctggacgggcggatccgcatggcg
gcgcgcgccgtcggcgtctccgtgacggtgccgacgttcaacgccgatccccgcatggcc
gaggatctgatccaccttcaggtcgaaaacgtgcccgccggtctcgtcagctgcggtccc
gaacggacggccgaacagattgccgacggcatcgtgcgcatcgtccgccgccatatcggc
gccctgttcagcgtcgacgacgcggcacaatggctgggcagcctcgaaccgcgtctcggc
aaactggcgatcgacgtcgccacccaggtgccgctgatgctgacggtcgcggtcgtcaga
cgcctgctggattccggcgtgacgctttcccagccgcgcggactgctggaagtgatgctg
cacgccggcaccgatcacgcgccggatgccctggccgaaatggcgcgcgccgcgctggtc
aagcagatcgccttcgggcttctcgaccggcgcggattgctgccggcgctggtgcttccc
gccgaatgggaccacttcatccgctcctatgacgccgctggagcgaccgagaagatcgag
atagccgaaaggctgcgcctgctggccgagaaagccaggcaggctctcgaggacgccaac
gagcggggatacgatcccatcatcatcgtgccgggcgagtggcgcctgctcacccagacg
ctgatgatccaccacaactgccgcattccggtgctggcggcggaggagatcgacagggat
ataacgatcgaaaccatcggagagatcgggcaaatccggaacgctgccggctccaaacaa
aggccgggctga

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