KEGG   Rhizobium sp. Kim5: Kim5_PA00219
Entry
Kim5_PA00219      CDS       T05501                                 
Symbol
virB4-1
Name
(GenBank) type IV secretion system protein VirB4 1
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Kim5_PA00219 (virB4-1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhk02044]
    Kim5_PA00219 (virB4-1)
Enzymes [BR:rhk01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Kim5_PA00219 (virB4-1)
Secretion system [BR:rhk02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Kim5_PA00219 (virB4-1)
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG AAA_22 FtsK_SpoIIIE AAA_16 ATPase_2 NPHP3_N AAA_33
Other DBs
NCBI-ProteinID: ARQ60690
LinkDB
Position
pRetKim5a:185265..187652
AA seq 795 aa
MTKGISALSNIATLRSRELGPETFIPYVRHVDETTIALESRALMTMIALDGVSFETSDVR
DLNGLHRSLNTLYRNIADERLALWTHVVRRRDNAYPEGRFANPFSDGLNARYRERMVRED
LFRNDLYLTLVWHPGRDPAEKAARLLSRLRKARRSDTELDGQALKHLRDRVADVVAGLQR
FEPRLLTLHEQDGILFSEPSEVLHQIVGGRREPIPLTEGRISSAIYSDRVIFGRETVEIR
HEADSRYAGMFGFKEYPATTRSGMLDAILTAPFELILTQSFAFTSKADARTIMGRKQNQM
VSAGDKAASQIEELGEAMDDLESNRFVFGEHHLALAVFAPSVKELTDHMAKARAYLTSGG
AVVAREDLGLEAAWWAQLPGNFRYRARSGAITSRNFAALAPYHSYPAGKKDGNEWGPAVA
MLKTASGSPFYFNFHHGDLGNTFVCGPSGAGKTVLSNFMLSQLEKHDPHMVFFDKDRGAD
LFVRAAGGTYLPLRNGVATGCAPLKAPEFTAENKVFLTGWITKLVRSGSGELSITELRDI
TSAIDGVADLPVERRSIGALRTFLNNTDPEGIAARLRRWERGGPLGWVFDNEADDIGIGA
RFIGYDMTDFLDNEEIRTPLMAYLFYRIEQLIDGRRIIIVIDEFWKALQDEGFRDLAQNK
LKTIRKQNGLMLFATQSPRDAIVSPIAHTIIEQCPTQIFLPNPRGDRADYVDGFKLTERE
FELVSRELSVESRRFIVKQGHNSVVAELNLNGFDDELAILSGRTANVELADAIRLEIGEG
REDWLAVFHQRRKTA
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgacgaaagggatctcagctttgtctaacattgcaacgctccggtcgcgcgagctcggg
ccggaaaccttcatcccctatgtcaggcatgtcgacgagacgaccattgcgctcgaatcc
cgagcgttgatgacgatgatcgctctcgacggcgtttccttcgagacatcagacgtcagg
gacctcaacggcctgcaccgcagcctgaacacgctctatcgcaatatcgctgacgagcgg
ctggcgctctggacgcatgtggtgcgccgccgcgacaatgcttatcccgagggacgcttc
gccaatcccttctccgacggtctgaacgcgcgataccgcgagcgcatggtgagggaagac
ctgtttcgcaacgatctttacctcacccttgtctggcatcccggccgggatcctgccgaa
aaggcggccaggcttctctcccggctgcgcaaggcccgccgatccgataccgagctcgac
gggcaggctctgaagcatctgcgtgaccgcgtggcggatgtcgtcgccggcctgcagcgc
ttcgagccgcggctgctcaccctccacgaacaggacgggatccttttctccgagccgagc
gaagtgctccaccagatcgtcggcggccggcgggagccgatcccattgacggagggacga
atttcctcggcaatctattccgaccgggtcattttcgggcgtgagaccgtcgagatccgt
cacgaggccgacagccgctatgccggcatgttcggcttcaaggaatatccggcgacgacg
cgcagcggcatgctcgacgctatcctgaccgcacctttcgagctcatcctgacgcagtcc
ttcgccttcacctcaaaggcagatgcccgaacgatcatgggccgcaagcagaaccagatg
gtcagcgccggcgacaaggcggcttcgcagatcgaggaactcggcgaggcgatggacgat
ctcgaatccaatcgcttcgttttcggggaacatcaccttgcgcttgccgtcttcgcgcct
tcggtcaaggagctgaccgatcacatggcgaaggcgcgcgcctatctcaccagcggcggc
gcggtcgtcgcccgcgaggatctcgggctcgaggccgcctggtgggcgcaattgccgggc
aatttccgctatcgcgcgcgctcgggagcgatcacgtcgcgcaacttcgcagccctggcg
ccctatcattcctatccggcgggcaagaaggacggcaacgagtggggaccggccgtcgcc
atgctcaagaccgcgtccggctcacccttctatttcaatttccaccacggcgacctcggc
aacactttcgtctgcggcccgtcgggtgcgggcaagacggtgctgtcgaacttcatgctg
tcgcagctcgaaaagcacgatcctcatatggtcttcttcgacaaggaccgcggcgccgat
ctcttcgtacgcgcagccggcggtacttatctgccgctgaggaatggtgtcgccaccggc
tgcgcgccgttgaaagcaccggaattcactgcggaaaacaaagtattcctaaccggttgg
atcaccaagctggtccgatccggatctggcgaattgtcgatcaccgagttgcgcgacatc
acctcggcgatcgacggggtggcggacctgccggtggagcgtcgctccatcggcgccctg
cgcaccttcctcaacaataccgatcccgagggcattgccgcacgtctgcgacggtgggag
aggggcgggccgcttggttgggtcttcgacaacgaggctgacgatatcggtatcggcgcc
aggttcatcggctacgacatgaccgatttcctcgacaatgaggagatccgcaccccgttg
atggcctacctgttctatcgcatcgagcagctgatcgacgggcgtcgcatcatcattgtc
atcgacgagttctggaaggcgctgcaggatgaaggctttcgtgatctcgcccagaacaag
ctcaagacgatccgcaagcagaacggtctcatgttgtttgcgacccagagcccgcgcgat
gccatcgtctcgccgatcgcccacacgatcatcgagcagtgcccgacccagatctttctt
ccgaacccgcgcggcgaccgcgccgactatgtcgacggcttcaagctgaccgagcgcgaa
ttcgagctcgtctcgcgcgagctctccgtcgagagccgccgcttcatcgtcaagcagggg
cacaacagcgtcgtcgccgagctgaacctcaacggcttcgacgacgaactcgccatcctc
tccggccggacggccaatgtcgagcttgccgatgccatccgattggagatcggcgaggga
cgggaggactggcttgccgtgtttcaccagaggaggaagacagcatga

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