KEGG   Rhizobium sp. Kim5: Kim5_PA00275
Entry
Kim5_PA00275      CDS       T05501                                 
Name
(GenBank) type VI secretion system-associated protein
  KO
K11896  type VI secretion system protein ImpG
Organism
rhk  Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhk02044]
    Kim5_PA00275
Secretion system [BR:rhk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Kim5_PA00275
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: ARQ60745
LinkDB
Position
pRetKim5a:complement(232240..234126)
AA seq 628 aa
MDPRLLRLYNDELAYMREMGAEFARAFPKVAARLGMESAEVADPYVERLLEGFAFMAARV
QLKLQSRFPEFTQHLLEMVYPHFLPPLPSMTIVRFEPDQDAGRLENGYLVPRGTKLLGRL
APGAVTHCEFRTAHDVHLWPIVVSAADYFSTPGQIAALDLPARQDAKAALRLRLRTTNGM
PFNKLGLEALTLHLTGPGGIGAALAEQLLGDACNIIARPVGRPIPWQEKIPVHALQQRGL
EPSCALLPEVPRSFDGYRLLQEYFALAERTLFVEVSGLADAVALSTAETLEIVFALRRVE
PRLERQLGPQNIVLFATPAINLFERQADLVHVSDKNTEHHVIVDRMRPLDFEVHSILEMS
GDGAKNEAAPVRFYPFYSISAHGQEEQHSRYYAIRREQRLMSEHQRLNGARTGYIGSETF
VSLVDRQAAPYSAELRHLSVNCLCSNRDLALLLPIGRDETDFTLEIGAPVTATRCVSPPS
RPRHSFANGDITWRLISHLSLNYLSISNSDRNDHRGAEALRELLRLYVDPVNAFASRQID
GIREIRSRPAVRRLSSGGQAAVARGIEVGIILDEAAFEGVGIFPLASVLNQFFAKYVSIN
SFTEMVVSTLQRGEVMRWPTMAGRRAIL
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggatccccggctcctgcgactgtacaacgacgaacttgcttatatgcgcgagatgggg
gccgagttcgcccgtgcattcccgaaggtcgccgcccggctcgggatggaatcagcggag
gtcgccgacccctacgtcgagcggcttctggaaggcttcgctttcatggcggcgcgggtg
caattgaagcttcagtctcgctttccggaattcacccagcacctcctggagatggtctat
ccgcattttctaccgccgctcccctcgatgacgatcgtccgtttcgagcccgaccaggat
gccggacgacttgaaaatggatacctcgtgccgcggggaaccaagcttttgggccgtctt
gctccgggcgccgtcacacattgcgagttccgcacggcccatgatgtgcatctctggcca
attgtggtgagcgctgccgattatttttcgacgccggggcagatcgccgcactggatctt
ccggcccggcaagatgcgaaggctgctttgcgactacgccttcgcaccaccaatggcatg
ccgttcaataaactcggactagaggctctcacactgcacctaacaggccccggtggcatc
ggcgccgcactcgccgaacagcttctcggtgacgcatgcaatatcatagcccgtccggtc
ggccggcctatcccttggcaggaaaagattccggttcatgcgctgcagcaacgcggtttg
gagccgagctgtgctctcctgcccgaggtgccacgctctttcgacgggtaccgtctccta
caggagtatttcgccctcgcggagcggacgttgttcgtcgaggttagcgggctggcagac
gcagtagccctgtcaactgccgagacccttgagatcgtcttcgcactcagacgtgtcgag
ccacggctggaacgacagctcgggccccaaaatatcgttctcttcgcaacgcccgcgatt
aatctcttcgaacgccaggcagatctcgtccacgtgagcgacaagaacaccgagcatcat
gtgattgttgacaggatgaggccgctcgactttgaggtccactcgatcctcgagatgagc
ggagacggggcgaaaaacgaagcggctcccgtgaggttctacccgttctatagcatcagc
gcgcacggtcaggaggagcagcattccagatactacgcgatccgccgggagcagcgcctc
atgtcggagcaccagcgtctaaatggcgcgcggactggctacatcggcagcgaaacgttc
gtttctctagttgatcgccaggcggctccctattcggcggaactccggcatttgtctgta
aactgcctgtgctcgaaccgggatctggcgctgctgctgccgatcggccgggacgagaca
gacttcaccctggaaatcggcgctccagttaccgccacccggtgcgtatcgcccccgagc
cgaccgcgccactccttcgccaatggcgatatcacttggcgattaattagccatctttca
ctgaactacctctcgatcagcaattccgataggaacgaccaccggggcgcagaagcgcta
cgtgaactcctccgcctctacgtcgatccagtcaatgccttcgcctcacggcagatcgac
gggatccgggagattcggtccaggcctgcggtcaggcgattgtccagcggtggacaagcc
gccgtagcacgtgggattgaggttggtatcatcctggacgaagcggccttcgaaggcgtt
ggcatctttccgctcgcctccgtgctcaaccagttcttcgcgaaatacgtatccatcaac
agcttcaccgagatggtcgtctcgacgctacagcgcggggaggtaatgcgatggccgacg
atggccggccgccgggcgatcctttga

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