Rhizobium sp. Kim5: Kim5_PA00361
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Entry
Kim5_PA00361 CDS
T05501
Symbol
ctrE
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00900
Terpenoid backbone biosynthesis
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
Module
rhk_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Kim5_PA00361 (ctrE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rhk01006
]
Kim5_PA00361 (ctrE)
Enzymes [BR:
rhk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Kim5_PA00361 (ctrE)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Kim5_PA00361 (ctrE)
2.5.1.29 geranylgeranyl diphosphate synthase
Kim5_PA00361 (ctrE)
Prenyltransferases [BR:
rhk01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Kim5_PA00361 (ctrE)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ARQ60827
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All DBs
Position
pRetKim5a:317938..318867
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AA seq
309 aa
AA seq
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MTSNHQADVVGDSDKLIEQALRAAMDTALSPAAPAHLRGALDAAVFPGGSRMRPKLCLKV
SYVCGEKHPELATRAAAAIELLHCASLVHDDLPCFDNAALRRGRPTVHRLFGEPIAVLAG
DALIVMAFKYLSLQAALTPELGGRMIEVVAEAVGPSHGLIAGQSMEAMTHVAIDRYHHYK
TGSLFVAAATCGALVSGADPAPWSKVGELLGHAYQIADDIADTVGRVEVLGKLPAVDTQL
NRPSIVRGQGLDSAAARFYAYLEQIGDTIPASPHKRSFVDWLNHSLCKGVAGPGKAGLIQ
QAALDCAPL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgaatcaccaagccgacgtggttggcgatagcgacaagctcatcgagcaggcg
ctgcgagctgccatggatactgctctaagtccggctgcgccggctcacttgcgtggagcg
ctggacgcggcagtgtttccaggtggctcccggatgcgccccaagctctgcttgaaagtc
tcctatgtgtgcggcgaaaaacatcctgagctggcgacaagagccgcggcagcaattgaa
ttgctgcactgtgcctcgttggtgcatgacgacttgccttgcttcgataacgccgcgcta
cgtcgcggcagaccgacggtgcaccggcttttcggagagcctatcgccgttttggccggc
gatgccttgatcgtgatggctttcaaatacctcagcttgcaggctgcactaacacctgag
ttgggcgggcgcatgatcgaggtggttgcggaggcggtcggccccagtcacggactgatc
gccggacagtcgatggaggcaatgacgcacgtcgctatcgaccgctatcaccattacaag
accggctccctctttgtcgcggcggccacgtgcggtgccctggtaagtggtgctgatccg
gctccgtggtctaaggtgggggaattgctcgggcatgcgtatcagattgccgacgacatc
gcagatacagtcggccgcgtagaagtgcttggcaaattgcctgccgtggacacgcagctg
aatcgacccagtatcgttcgcggccaaggattggacagcgcagccgccagattttacgcg
tacctcgaacagataggtgacaccattcctgccagccctcacaaacggtccttcgttgac
tggctaaatcattcactttgcaaaggcgtggcgggaccgggaaaagccggtctgattcaa
caggcggcgctggattgcgcacctttatga
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