Rhizobium sp. Kim5: Kim5_PA00385
Help
Entry
Kim5_PA00385 CDS
T05501
Symbol
hemN-1
Name
(GenBank) coproporphyrinogen III oxidase 1
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00860
Porphyrin metabolism
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Kim5_PA00385 (hemN-1)
Enzymes [BR:
rhk01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
Kim5_PA00385 (hemN-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
ARQ60850
LinkDB
All DBs
Position
pRetKim5a:337136..338407
Genome browser
AA seq
423 aa
AA seq
DB search
MLMNADTGTIDHNDVAVEGLCDLAQDMIPNTRFSPSHKTVVAGGIRPSITRRDTLITDYL
AMLREEIRLVAEQVPQALSVGDVHFGGGSPTIMPSADFLSLMELLRGRFALERGATIAIE
VDPRTFTTDMAEALERTGVNRASVGVQSFDPVVQKAINRIQSEAQVMTAVENLRLYGVRR
INFDLMFGLPNQTVQSCLESAMFAIAMRPDRLAVFGYSHVPSFRKNQRLIDTAALPDIAA
RAEQASAMADTLVAAGYLQIGLDHFALSDDELAIAQRAGRLRRNSLGYSAETCPTVIGLS
ASAIGRCGDGYVQNDLTQSCYNRHIASGRLAISRGYRLTTEDRVRAAIIEQLMCYLEADI
STISTAQGFDQTHLVSSAKQLEILAEDGIVEFDNGLVRVRHERRSALRHVAAAFDAYLGR
QPI
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgaacgcggacacaggaactatcgatcataacgatgtcgccgtcgaaggcctt
tgcgatctcgcgcaagacatgatcccaaacacccgcttttctccatcgcacaaaacggtt
gtagcaggtggtataaggcctagcatcactcgtcgggacactttgataaccgattatctg
gcaatgctgcgcgaggaaatccgcctggtcgccgagcaagtgccgcaggcactctccgtg
ggtgacgtgcactttggcggcggatccccgaccattatgccatcggcagacttcctgtcg
ctaatggaactcctgcgcggccgttttgcgcttgagcgaggtgcaaccattgccattgag
gtcgacccgcgcacgttcaccaccgatatggccgaagccctagaaagaaccggtgtgaat
cgcgcaagcgtcggtgtgcagagcttcgatcccgtcgtacaaaaagcgatcaaccggatt
cagagcgaggcgcaagtgatgaccgccgtcgaaaacctccgcctgtatggggtcaggcgt
atcaatttcgacctgatgttcggtttgccgaaccaaaccgtccagtcctgtctcgagagc
gctatgttcgctattgcgatgcgtcccgaccgcctcgcggttttcggttattcccacgtt
ccatcttttcgaaaaaatcagcgcttgattgacacagcagcactgcccgatatagccgcg
cgagctgagcaggcctcagccatggccgatacgttagttgcagcaggctatctgcaaatt
ggtctcgaccattttgctttgtcggatgacgagcttgcaatagcacagagagctggtcgt
ctgcgccgaaattcgcttggttactctgccgaaacctgcccaactgtcatcggtttgagc
gcgtccgccattggtcgttgcggcgacggttacgttcaaaacgatctcacgcaaagctgt
tataaccgacacatagcatccggccgcttggcgatctcaaggggctaccgtttaactacc
gaggatcgcgtaagagctgcaatcatcgaacagctcatgtgctacttggaggcggacata
tcaacaatcagtacggctcagggatttgatcagacccatctagtgagttcagctaagcag
ctagagattctggctgaggatgggatcgttgagtttgacaacggtttagtccgtgtgcgg
cacgaacgtcgctctgcccttcgccatgtcgctgccgcgttcgatgcttatcttggccgc
cagccgatctag
DBGET
integrated database retrieval system
