Rhizobium sp. Kim5: Kim5_PA00485
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Entry
Kim5_PA00485 CDS
T05501
Name
(GenBank) HlyD family secretion protein
KO
K20345
membrane fusion protein, peptide pheromone/bacteriocin exporter
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Kim5_PA00485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_PA00485
Transporters [BR:
rhk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Kim5_PA00485
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
CusB_dom_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ARQ60945
LinkDB
All DBs
Position
pRetKim5a:410047..411228
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AA seq
393 aa
AA seq
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MAPSDYRLAVPLSAETASCTAESILARRSGRSLSIYRAILLFVAAAFGSLPLVTIPVSMQ
SVGTIRPIVEKTPLIAPVSGRISRVLAFENDVVAKGKEIIAFDDHVIEEKLSGVLADIHA
KSDLAHDFQTLISSGARLSVSPPLQTESATAERVHFLNLLRENQNARSNAAAELDRAKRL
VSAAAAPAKTVDEKAFALQNIEVQGEILVRRKTADWNQKLLDANLRLKELTATLHQLEHE
RDLHRIRAPVSGALEQFSGLAHGSYVQSGQTVGWISPNDDLVAEIYVSPNDIGFVQPGQP
VRLQVDAFNYNQWGVIKARVVEVAQDFTLHDGNPVFKVQCALSRSELALKSGAIGHLKKG
MTVRARFLLANRTLLQLLYDEADDWLNPMLAGR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggctcctagtgactacagactagcagttcccctttctgctgaaacggccagctgcacc
gcagaaagcatactggcgcgacgatcaggacgatccttgagcatttatagggcgatcttg
ctcttcgtcgccgcggcatttggctcactgccactcgttaccataccggtctccatgcag
agtgtcggtactattcgcccgatcgtggagaagacgcccctgatagcgcccgtctccgga
cgcatctcccgtgtccttgcctttgagaacgatgtcgttgctaaggggaaggaaataatc
gcctttgacgatcatgtaatcgaggaaaagctcagcggggttttagccgacattcatgcc
aagagcgatcttgcccatgacttccaaacgctgatttcttccggcgcaaggctcagcgtc
tcgccccccctccaaaccgaatccgcgacggctgaaagggtgcattttctcaacttgctg
cgcgagaaccaaaatgcgcgcagtaacgccgcggcggaactcgaccgcgcaaagcgactt
gtctcggctgctgcggcgcccgcgaagaccgttgacgagaaggctttcgctctccaaaat
atcgaggtccaaggcgagatcctcgtgcgacgcaaaaccgctgattggaaccagaagctc
cttgatgctaacctgcgcttaaaggaactcacggccaccttgcatcagctcgagcacgaa
cgggacctgcaccgcatccgcgccccagtatcgggtgctctcgagcagttctccggcctc
gcgcacggaagctacgtgcagagcgggcaaaccgttggttggatctcgccgaacgacgat
ctggtggcggaaatctacgtctcccccaacgacattggctttgtgcagcctggtcagccg
gtgcggctccaagtggatgcctttaactacaaccaatggggtgtcatcaaagcaagggtg
gtcgaggtggcgcaggacttcactctgcatgacgggaacccggtcttcaaggtccagtgc
gcgctctctcgcagcgaactcgcgctgaaaagcggggccatcggccacctgaagaaaggc
atgaccgtgcgggctcgctttctgttggccaatcgcactctcctgcaactgctctacgac
gaggcagacgattggctcaacccgatgctggcggggcgctaa
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