Rhizobium sp. Kim5: Kim5_PA00486
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Entry
Kim5_PA00486 CDS
T05501
Name
(GenBank) bacteriocin ABC transporter ATP-binding protein
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02010
ABC transporters
rhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Kim5_PA00486
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Kim5_PA00486
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhk01002
]
Kim5_PA00486
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_PA00486
Peptidases and inhibitors [BR:
rhk01002
]
Cysteine peptidases
Family C39
Kim5_PA00486
Transporters [BR:
rhk02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Kim5_PA00486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_16
AAA_29
Zeta_toxin
RsgA_GTPase
AAA_23
AAA_30
AAA_25
nSTAND1
AAA_24
DUF87
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ARQ60946
LinkDB
All DBs
Position
pRetKim5a:411256..413403
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AA seq
715 aa
AA seq
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MSSKAIKFKQRDITDCGAASLASVAAFYGYKLPLARIRQYASTDRSGTSVLGLTEAAQKL
GFIAKGVKGGFDSLYKIPKPAIAHVVKEDLHHFVVVHAIDAKWVIVMDPALGEICKVPHQ
EFMEQWTGVLVLLVPADTFNRRDETTSPLARFARLLAPHRTVMAQALVGALVTTVLSLST
AIYVQKIVDHVIPAGNRNLLNLMSIAMLLILAIQILINLLRGRLVLQTGQKIDVCLILGY
YNHILALPQKFFDSMRMGEIVSRMNDAVKIRSFLNDVSINMFVDILMILFSFGMMFIYSW
NIALIVALAIPMYILVYWAINRMNRNLQRVIMENDAKLEAQLVESLGAVSTIKTSGVESF
ANFKMETRFVKMLHSVYSSGLISICGDNASTLLSVLFTIVLMWFGTTLALEQAVTPGELL
SCYTLLGYITRPVARLIQTNRIVQDAFIAADRLFEIFELESASSSGIDATKTDLGDIRLE
NVTFRYGAQAEVFSDLSVSFRQGELTAVVGESGSGKSTLAALLQNVYQLEDGCIRIGQYA
LQDFSSASLHKVMAAVPQSIDVFSGSVIENIALGEFEPEFDKIVRICDRIGLRECIERWP
GRFQAHLGENGVRLSGGEKQRLALARALYRDPDVLILDEATSSLDSAAEEFVLRVVEDLS
RAGKTIIVITHRLSTVRGADNIVVLDKGRVIEEGKHADLVRTDGPYARLWRAPRS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaaggccattaagttcaaacagcgtgacatcacggattgcggcgccgccagc
ctcgcatctgtcgcagccttctatggctacaagttgccattggcgcgcatccgccagtat
gcgtcgaccgaccgctccggtacgagtgtgctggggctcacggaagcggcgcagaagctg
ggcttcatcgcgaaaggcgtcaaaggtggcttcgacagcctgtacaagatccccaagccc
gctatcgcgcacgtcgtcaaggaggacctgcaccatttcgtagtggtccatgcgatcgac
gccaagtgggtcatcgtcatggacccggccttgggcgaaatctgcaaagtgccgcatcag
gaattcatggagcaatggaccggcgttctggttttgctggttccggcagacacattcaat
cgtcgagacgagaccacgtcgcccctcgcccgattcgcccgcctactcgcgccacaccgc
acggtgatggcgcaggctctcgtcggcgctcttgtgacgaccgtcctcagtctctcgacg
gcgatctacgttcagaagatcgttgatcacgtgatcccagcgggaaaccgcaacctgctc
aacttgatgagcatcgcaatgctgctgatcctagcgatacagatcctgatcaacctccta
agaggccgactcgtcctgcagacggggcagaagatcgacgtatgcttgatcctcggctat
tacaatcacatcctggccctgccccagaagttcttcgatagcatgcgcatgggagaaatc
gtgtcgcgcatgaacgacgctgtgaaaatcaggagcttcctgaacgacgtttcgataaac
atgtttgttgacattttaatgatactgttctcgttcggaatgatgttcatctattcctgg
aatattgctttgatcgtggcgctcgccattccaatgtacatcctggtatattgggccatc
aatcggatgaatcgaaatctccaacgagtcatcatggaaaatgacgccaaactcgaggcg
caactggtagaatcactcggagctgtctccaccattaagacttccggcgtcgagagcttc
gcaaacttcaaaatggagacccgcttcgtaaagatgctgcattccgtctacagctccggg
ctgatctcaatctgcggcgacaacgcctcgacgttgctgtcggtcctgttcaccatcgtg
ctgatgtggtttggaaccacgcttgcgctcgaacaggccgtcacgcccggcgaattgctg
tcctgctatacgttgcttggctatatcacccggccggtcgcccgcctgatccagaccaac
cggatcgttcaagacgcgtttatcgcggcggatagacttttcgagatctttgaactggag
tcggcaagcagcagcggcatcgatgctacgaagaccgatctcggagatattcgcctggag
aacgtcacattccgctatggcgcgcaggcggaggttttcagcgatctaagcgtctccttt
cgccaaggagagttgacggccgtcgtgggtgagagcggctcgggcaaaagcacccttgcg
gctctgctgcagaatgtctaccagcttgaggatggatgcattcggatcggccaatatgcc
ctccaggatttctcgagcgcatcactgcacaaggtcatggctgcagtaccgcaatcgata
gacgtcttctccggttccgtgatcgagaacatcgccctgggcgagttcgaaccggagttc
gataagatcgtacgcatctgtgatcgaataggactgcgggagtgcatcgagcgctggccc
gggcggttccaggcccatctgggcgagaacggggttcgcctctccggaggtgagaagcag
cgcctcgcattggctcgggccctgtaccgggatcccgacgttctaatccttgacgaagcg
acctcctctctggactcggcagccgaagaatttgtgctgcgggttgttgaggatctgtct
cgcgctgggaagaccatcatagtcatcactcatcggttgagcaccgttcgtggggcggac
aatattgtggtcctggacaaggggcgggtcattgaggagggaaagcacgctgacctagtg
agaactgatggcccttacgctcgattatggcgggcgccaaggtcgtga
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