Rhizobium sp. Kim5: Kim5_PB00177
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Entry
Kim5_PB00177 CDS
T05501
Name
(GenBank) oligopeptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Kim5_PB00177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_PB00177
Transporters [BR:
rhk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Kim5_PB00177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ARQ61141
LinkDB
All DBs
Position
pRetKim5b:complement(190115..192019)
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AA seq
634 aa
AA seq
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MQKWKRFAFGFVLATLGLTAVAGAQEYTSLPRKETLIVENPEGTIKNPGWFNIWVNGGGG
VSTGLQQLTMDTLWYIDPEQGLGGAAWDNSLAADKPQYNADFTEMTVKLRKGLYWSDGVE
FTADDVVYTVKTQMDHPGMVWSAAFSVQVASVEATDPQTVVFKLKKPNSRFHAIFTVRWN
GAWIMPKHVFEKVEDPLRYDFANPVSLGAYKLKAYDPQGKWYTWEKRDDWQRTSLARFGE
PAPKYVTYTDPGPPDKRTIAQLEHNLDIIHDNTPEGMFTLKEKSKTIETWFPGFPFAHPD
PTLPAVIFNTQEAPFDNADVRWALALLIDIKAVDMASYRGAATLSALGVPPTAATMKDYQ
APMQDWLKNFEIDTGKSKIKPYDPTVGQQIADLLRKQPKFKDQIPTDPEAITGAFGYGWW
KPDPKAAGELLEKAGFKKSGGKWLTPDGQPFKIRMTVEGDTRSVFTRAGTLIAQQWAAFG
IDAKAVPAAKLWQTALQPGDFQVAIAWSVETWGGDPDLSFFLDSWHSQFVAKKGDVQPPR
NWQRWSNPELDKIIESIRGISADDPKGMELGKDYLKLVAKEMPTIPLMSYNVFTSMDTTY
WTGYPTIKDPYTDPVPNWANSRLMMVKLKPAQSQ
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagtggaagaggtttgcattcggcttcgtgctggccacgctcggcctgaccgca
gtggccggagctcaggaatacacctccttgccgcgcaaggagacgctcatcgtcgaaaat
ccggaagggacgatcaagaatcccggctggttcaacatctgggtcaatggcggcggcggg
gtctcgaccggcctgcagcagctgaccatggatacgctctggtatatcgaccccgaacag
gggcttggcggcgcggcctgggacaattcgctcgccgccgacaagccgcaatataatgcc
gacttcaccgaaatgaccgtgaagctgcgcaaggggctctattggagcgacggcgtggaa
ttcacggccgacgacgtggtctacaccgtcaaaacgcagatggaccatcccggcatggtc
tggagcgcggccttctcggtgcaggtggcaagcgtcgaggcgaccgatccccagaccgtc
gtgttcaagctgaagaagccgaattcgcgcttccacgccatcttcaccgtgcgctggaac
ggcgcctggatcatgccgaagcatgtgttcgagaaggtggaggatcctcttcgctatgat
ttcgccaaccccgtctcgctcggcgcctacaagctgaaggcctatgatccgcagggcaaa
tggtacacctgggagaagcgcgacgactggcagcggacctcgcttgcccgcttcggcgag
ccggctccgaaatatgtgacctacaccgatccaggcccgccggataagcgcacgatcgcc
cagctcgagcacaatctcgatatcattcacgacaacacgccggagggcatgttcaccctc
aaggagaagtcgaagaccatcgaaacctggttcccgggcttccccttcgcccatccggat
ccgacactgccggcggtcatcttcaacacccaggaagcgccgttcgacaatgccgacgtg
cgctgggcgctggcgctcctgatcgacatcaaggccgtcgacatggcgagctaccgcggt
gcggcgacgctttcggcactcggcgtgccgccgacggcggccacgatgaaagactatcag
gcgccgatgcaggattggctgaagaatttcgagatcgataccggcaagagcaagatcaag
ccctatgacccgaccgtcgggcaacagatcgccgatctcctgcgcaagcagccgaagttc
aaggaccagatcccgaccgatccggaggcgatcaccggtgccttcggctacggctggtgg
aaaccggatccgaaagcggctggcgagctgctcgaaaaggccggcttcaagaaatccggc
ggcaaatggctgacccctgatggacaacccttcaagatccggatgacggtcgaaggcgac
acacgctcggtcttcacccgcgccggcacgctgattgcccagcaatgggcggccttcggc
atcgacgccaaggccgttcccgccgcgaaactttggcagacggcgctgcagcccggcgat
ttccaggtggcgatcgcctggagcgtcgaaacctggggcggcgatcccgacctctccttc
ttcctcgacagctggcactcgcagttcgtggcgaagaagggtgacgtccagccgccgcgc
aactggcagcgctggtccaatccggagctcgacaagatcatcgagagcatccgcggcatc
agcgccgacgatccgaagggcatggagctcggcaaggattatctgaagctggtcgccaaa
gagatgccgacgatcccgctgatgtcctataacgtcttcacctcgatggatacgacctat
tggaccggttatcccaccatcaaggacccctatacggatccggtgccgaactgggccaat
tcgaggctgatgatggtcaagctgaagccggctcaatcgcaataa
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