Rhizobium sp. Kim5: Kim5_PB00178
Help
Entry
Kim5_PB00178 CDS
T05501
Symbol
abfA
Name
(GenBank) alpha-N-arabinofuranosidase
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00520
Amino sugar and nucleotide sugar metabolism
rhk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Kim5_PB00178 (abfA)
Enzymes [BR:
rhk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
Kim5_PB00178 (abfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
Motif
Other DBs
NCBI-ProteinID:
ARQ61142
LinkDB
All DBs
Position
pRetKim5b:complement(192203..193711)
Genome browser
AA seq
502 aa
AA seq
DB search
MKTSVVAHRDFRISTIDARLYSSFLEHLGRAIYGGIYEPGHPTADEDGFRRDVLELVREL
DTPYCRYPGGNFVSAYNWEDGVGPRSERPVRLDLAWRTREANQIGVNEFVDWCKKANTKP
MLAVNLGSRGLDAARNFLEYCNHPGGTYWSDLRRKHGWSNPHDVKLWCLGNEMDGPWQVG
HKSAYEYGRLADETAKAMRGFDKSLELVVCGSSNSDMKTYPQWEAEVLEQCYDSADYISL
HMYFANREKNTLNYLARATKLDRYITTIGGVIDYIKAKKRSKKTIGISFDEWNVWYHSNQ
QDKEILARDEWPDAPHLLEDVYNFEDVLQVGGILNTFIRRSDRVRIACIAQLVNVIAPIM
TEDGGAAWRQTIYYPFYYASRYGRGAALQLVVDGPTYDSDEENEVPYLDVSAVHSEDGRT
LTFFAVNRHPDTALDLDVRLEGFGGARLIEQVEMTHGDLEAVNTARRPETVVPVKVESAK
IEDGRVRAPLKPLSYNVIRLSV
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacgagtgtcgttgcccaccgcgattttcgcatctcgaccattgacgccaggctc
tacagctcgtttctcgagcatctcggcagggcgatctacggcggcatctacgagcccgga
catccgacagccgacgaagacggctttcgccgcgacgtgctcgagctggtgcgcgagctc
gacacgccctactgccgctatcccggcggcaacttcgtctcggcctataattgggaagac
ggcgtgggcccgcggtcggagcgcccggttcgcctcgatcttgcctggcgcacccgcgaa
gccaaccaaatcggcgtcaacgaattcgtcgactggtgcaagaaggccaataccaagccg
atgctcgcggtcaatctcggctcgcgcggcctcgatgccgcccgcaatttcctggaatat
tgcaatcatccgggcggcacctactggtcggacctgcgccgcaagcacggctggtccaat
ccgcacgacgtgaaactgtggtgcctcggcaacgagatggacgggccctggcaggtcggc
cacaaatcggcctatgaatatggccggctggcggacgagacggcgaaggccatgcgcggc
ttcgacaagtcgctcgaactcgtcgtctgcggctcctccaattccgacatgaagacctat
ccgcagtgggaggccgaggttctcgagcagtgctatgacagcgccgactacatctcgctg
catatgtatttcgccaaccgggagaagaacacgctgaactacctcgcccgggcgacgaag
ctcgaccgctacatcaccacgatcggcggcgtgatcgactacatcaaggcgaagaagcgc
tcgaagaagacgatcggcatttccttcgacgaatggaacgtctggtatcattccaaccag
caggacaaggagatcctggcgcgcgacgagtggccggatgcgccgcatctgctcgaagac
gtctataatttcgaggacgtgctgcaggtcggcggcatcctcaacaccttcatccgccgc
tccgaccgggtgcgcatcgcctgcatcgcccagctcgtcaacgtcattgcccctattatg
accgaggacggcggtgccgcctggcgccagacgatctattatcccttctattacgcctcc
cgctatggccgcggcgcggcactgcagctcgtcgtcgacggcccgacctatgacagcgac
gaggagaacgaggttccctatctcgacgtctcggccgtccattccgaggatggcagaacg
ctgaccttctttgccgtcaatcgccatccggatacggcactcgatctcgacgtgcggctg
gaaggttttggcggcgcccggctgatcgagcaggtggaaatgacccatggcgatctcgaa
gccgtcaacacggcgcggcggccggagacggtggtgcctgtaaaggtcgagagcgcaaaa
atcgaggacggacgggtgcgcgcgccgctgaagcctctgtcctataatgtgatccggctg
tcggtgtga
DBGET
integrated database retrieval system