Rhizobium sp. Kim5: Kim5_PB00200
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Entry
Kim5_PB00200 CDS
T05501
Symbol
glgX-2
Name
(GenBank) glycogen debranching enzyme GlgX 2
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00500
Starch and sucrose metabolism
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
Module
rhk_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Kim5_PB00200 (glgX-2)
Enzymes [BR:
rhk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Kim5_PB00200 (glgX-2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
hDGE_amylase
DUF4874
Motif
Other DBs
NCBI-ProteinID:
ARQ61164
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All DBs
Position
pRetKim5b:213959..216115
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AA seq
718 aa
AA seq
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MSFSFSELDFLKPELGAEYIGSGTHFAVFSAHAEQIELCLFSPDGKNEIARLPLPKREGD
IWSGYIAGLGPGTVYGYRAHGPYDPQAGHRFNPNKLLLDPYAKQVTGDLKWDDALFGYRI
GEDDLSFDERDSAPFMVKSVVQDPDFDWAGEEAIRRPWPDTIIYEAHVRGLTMTHPKVPD
RLRGTFLGMCSDPIVDHLVKLGISAIELLPIQYFLDDRYLLEKKLRNYWGYQTLGFFAPQ
TRYLSNDRITEIKTMVKRFHAAGIEVIMDVVYNHTAEGSEKGPTLSFRGLDNASYYILSP
DDPRHTFDTTGTGNTLNVANPMVMRMVLDSLRYWVGVMHIDGFRFDLASTLGRQDLEFDR
QGLFFGAIRQDPILSGVKLIAEPWDIGEGGYQVGGFPHPFREWNDKFRDDVRRFWKGDGG
MVSELAARITGSALQFNHSDRGATSSINLLSAHDGFTLMDTVSFDGKHNEANGEDGRDGH
SDNHSDNMGVEGATDNADINAARARRRRNMMATLMLSQGVPMILAGDELGNSQGGNNNAY
CQDNEIGWTGWDGLEDPFLDFCRQAVAFRKAHPVLRQERFLTGDTSEDGRIEIAWYKPDG
GFMDDVAWNDDGLQVLGVYLSKSAHAPDTETMDDLFLVFNAGGDCQVHLPEVNGLTEWSR
VLDTGAETGAFDVHNQDNPVMVYTQSLAVFAPKGQTQPPEGASKAQRRRWFQFGRRGK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagcttttcattttcggaactcgacttcctcaaaccggagctcggggcggaatatatt
ggttcaggcacccacttcgccgtcttctcagcccatgcggaacagatcgagctttgcctc
ttctcccccgacggaaagaacgagatcgcgcggctgccgctgcccaaacgcgagggcgat
atctggtcgggctatattgccggcctcggccccggcacggtctacggttatcgcgcccac
gggccctacgacccgcaggccggccatcgcttcaatccgaacaagctgctgctcgatccc
tatgccaagcaggtaacgggggacctgaaatgggacgacgcgctgttcggctaccggatc
ggcgaggacgatctttccttcgatgagcgcgacagcgcacccttcatggtcaagagcgtg
gtgcaggatcctgatttcgactgggcgggtgaagaggcgatccgccgcccctggcccgac
accatcatctacgaggcgcatgtgcgcggcctgacgatgacgcatccgaaggtgcccgac
cggttgcgcggcacctttctcggcatgtgcagcgatccgatcgtcgaccatctcgtcaag
ctcggcatttcggcaatcgagctcttgccgatccagtacttcctcgacgatcgttatctg
ctggaaaaaaagctgaggaactactggggctaccagacgctcggcttttttgcgccgcag
acgcgttatctctccaatgacaggatcaccgaaatcaagaccatggtgaagcggttccat
gccgcgggcatcgaggtcatcatggatgtggtctacaaccacacagccgagggcagcgag
aaggggccgacgctgtccttccgcgggctcgacaatgcgagctactacatcctctctcca
gacgacccgcgccataccttcgacacgacgggcaccggcaatacgttgaacgttgccaat
cccatggtgatgcgcatggtgctcgatagcctgcgctattgggtgggggtcatgcacatc
gacggcttccgcttcgatctcgccagcacgctcggccgtcaggacctggagttcgatcga
cagggtctgttcttcggcgctatccgtcaggatccaatcctgtcgggcgtcaagctgatc
gccgaaccctgggatatcggcgaaggcgggtatcaggtcggcggtttcccgcaccctttt
cgcgaatggaacgacaagttccgcgacgacgtgcgccggttctggaaaggcgacggcggc
atggtgtcggaactggcggcgcgcatcaccggctcggcgctgcaattcaaccattcggac
cggggggcaacctcctcgatcaatcttctgtcagcccacgacggcttcaccctgatggac
accgtctccttcgacggcaagcataacgaggcgaacggcgaggacggccgggacggccat
tcggacaatcattccgacaatatgggtgtggagggcgccaccgataatgccgatatcaat
gcggctcgggcacgccgtcgccgcaacatgatggcgacgctgatgctgtcccagggcgtg
ccgatgatcctggccggcgacgagctcggtaacagccagggcggcaacaacaacgcctat
tgccaggacaacgagatcggctggacgggttgggacgggctcgaggatccctttctcgat
ttctgccggcaggctgtcgccttccgcaaagcccatcccgtgctccggcaggagcggttc
ctgaccggagatacgagtgaggatgggcgcatcgaaatcgcctggtacaagccggacggt
ggtttcatggatgatgtggcctggaacgacgacggattgcaggtgctcggcgtctacctc
tcgaaaagcgcgcatgcgccggataccgagacgatggacgatcttttcctcgtcttcaac
gctggcggtgattgccaagtgcatctgccggaggtgaacgggttgactgagtggtcacgg
gttctcgacaccggcgcggagaccggggccttcgacgtgcacaatcaggacaatccggtc
atggtctacacccagagcctggctgtctttgcgccgaaaggccagacccagcctccagag
ggggcgagcaaagcccagcgccgccggtggttccagttcggccgtcgcggcaaatag
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