Rhizobium sp. Kim5: Kim5_PB00408
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Entry
Kim5_PB00408 CDS
T05501
Symbol
soxD-2
Name
(GenBank) sarcosine oxidase delta subunit SoxD 2
KO
K22085
methylglutamate dehydrogenase subunit B [EC:
1.5.99.5
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00680
Methane metabolism
rhk01100
Metabolic pathways
rhk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Kim5_PB00408 (soxD-2)
Enzymes [BR:
rhk01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.99 With unknown physiological acceptors
1.5.99.5 methylglutamate dehydrogenase
Kim5_PB00408 (soxD-2)
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GFIT
Motif
Pfam:
SoxD
zf-ribbon_3
Lar_restr_allev
zf-HYPF
Motif
Other DBs
NCBI-ProteinID:
ARQ61369
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All DBs
Position
pRetKim5b:436179..436460
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AA seq
93 aa
AA seq
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MASLISCPHCGARPKEEFSIRGDAGLIRPAPDAGAEAWFDYVYLRGNPRGRHSEYWHHSS
GCRRWLIVERDTATHAVHGVKDAALAKLGGEPA
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcctgatttcctgtccccattgcggcgcccggccaaaggaggaattctcgatc
cgcggcgatgccggccttatcaggccagcgccggacgccggcgcggaggcctggttcgac
tatgtctatctgcgcggcaatccgcgcggccgccacagcgaatactggcaccattcctcc
ggatgccgccgctggctgatcgtcgaacgcgataccgccacccatgcggtccatggcgtc
aaagacgccgcccttgcgaagctcggcggagaaccggcatga
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