Rhizobium sp. Kim5: Kim5_PC00093
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Entry
Kim5_PC00093 CDS
T05501
Name
(GenBank) LacI family transcriptional regulator protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhk03000
]
Kim5_PC00093
Transcription factors [BR:
rhk03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Kim5_PC00093
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
LacI
HTH_Tnp_ISL3
HTH_26
DUF2122
HTH_IclR
TetR_N
Motif
Other DBs
NCBI-ProteinID:
ARQ61504
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Position
pRetKim5c:90911..91936
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AA seq
341 aa
AA seq
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MKKTTISDVARKAGLSTATVDRALNDRGGVSAANRQRVFRAAKELGYLPTEGMLALPSRP
AHLEFFIPFAHNSFMQDVARKITTFASSLPLVASCNVTALDGIDPDALVAALEGLPLRTN
GVGVIAVDHPKTRHAIRRLCESGVRVVTIVTDVLSTPRSAFVGVDNLVAGRTAALIMGLT
SREKKGSIGLFLGSRTLHGHQQREYGFRTLLEEQFKHLTILPAIETRDENKLSQPAMERM
LRDTDDLVGVYCVGAGRAGIAEVLQAAKGNKRPFVIMHDLTDATRAWLAEDLIDVVIDQN
ARLIGEQVVIRLLGSIAASTPTLSLKNIEPRIIFRENIPLV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacgaccatttccgatgtcgcccggaaggctggcctctcgactgcaacggtc
gatcgagcattgaacgaccgtggtggtgtcagcgccgccaatcgccagagggtgtttcgc
gccgcgaaggaactgggctatctgccgaccgagggaatgcttgccttgccctcgcgcccc
gcacatctggagttcttcatcccctttgcgcacaactcattcatgcaggacgtcgccagg
aagatcaccaccttcgcgtcatccctgccgctcgtggcgtcgtgcaatgtcacggcactc
gacggcatcgaccctgacgcgctcgtagcggcgctggaaggtcttccgctccggaccaac
ggcgtcggggtgattgccgtcgatcacccgaagacacggcatgcgatccggcgcctgtgc
gaatccggggtccgcgtcgtgaccatcgtgacggatgttctctcgaccccacgctctgcc
ttcgtcggcgtcgacaatctggtggcggggcgaaccgcggcgctgatcatgggcctcacg
tcgcgtgagaagaagggatcgataggactgttcctcggctcgcgaacgctccacggacac
cagcagcgggaatatggattccggacattgctggaggagcaattcaagcatctgacgatc
cttcctgccatcgaaacccgtgacgagaacaagctgtcccagccggcgatggaacggatg
ctgcgcgacaccgacgatctcgtcggcgtctattgcgtcggcgcaggcagggccggcatc
gccgaagttctgcaagcagcgaaaggaaacaagcgtcccttcgtcatcatgcatgacctc
actgacgcgacgcgggcatggctggcagaagatctgatcgacgtcgtgatcgaccagaat
gcgcgcctgatcggcgagcaggttgtcataagacttctcggctcgatcgcggcaagcacg
ccgaccttgtctttgaagaacatcgagccacggatcatctttcgcgagaatatcccactc
gtttga
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