Rhizobium sp. Kim5: Kim5_PC00234
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Entry
Kim5_PC00234 CDS
T05501
Name
(GenBank) phospholipase D-like domain-containing protein
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00564
Glycerophospholipid metabolism
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
Kim5_PC00234
00565 Ether lipid metabolism
Kim5_PC00234
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Kim5_PC00234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rhk04131
]
Kim5_PC00234
Enzymes [BR:
rhk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
Kim5_PC00234
Membrane trafficking [BR:
rhk04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
Kim5_PC00234
Endosome - Golgi transport
Others
Others
Kim5_PC00234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_2
PLDc
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ARQ61645
LinkDB
All DBs
Position
pRetKim5c:232621..234132
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AA seq
503 aa
AA seq
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MTALETMLNQPYLLRTKAQQPGGGEKQELEGYAEKAAFLINGNQYFAELARTLRQARRSV
WIVGWDFNPDIRMEPEKSDETLADLLHALAAANPALEIRILIWALGPIYSDKSLQVLRKK
NFPRNAGIDLRFDLQNTVRGCHHQKLVCIDDAVAFIGGMDLTSRRWDTRRHRAREALRRD
PEGVSYDPLHDVQAMVTGDAARLIGDIARRRWERATGEKHGPLAESFPFTWPRDVAVSLK
QIPVSFVLTEPATTFRAGISDGIASTLDIIARARRQLYIEAQYLASFRVADALAARLQEE
DGPEIVVICTRLSHGLIEKLFMGGNRDRVIRRLKRADRADRFRVYFPVVPGPPVPGASEP
RKADGVEVLIHSKLIIADDELIRIGSSNLNNRSEGLDSECDMLLEAGNDEHRGAIAELRH
HLLAEYLGTTTETFAAAYAQSGSIIQAVDKLNDGPRGLREFAVDLSGSISPIRGTALFDP
ARPLGLLDRLGLGALFRLLIRPA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgttagaaaccatgctcaatcaaccctacctgcttagaacaaaagcgcaacag
ccaggcggcggtgaaaaacaggaactcgaaggctacgccgaaaaagcggccttcctgatc
aatggcaaccagtatttcgccgagctggcgcgcacgctgcggcaggcgcggcgcagtgtc
tggatcgtcgggtgggatttcaatccggacatccggatggagcccgaaaaatccgacgaa
acattggcagacctactgcatgccctggcggcggcaaatccggcacttgaaatacgcatc
ctcatctgggcgctcgggccgatctattcggacaaatctctgcaggtgcttcgcaagaaa
aacttcccgaggaatgccgggatcgatctgcgcttcgatcttcaaaacacggtgcgcggc
tgccaccatcagaaactcgtctgtatcgacgacgccgtcgccttcatcggcggcatggac
ctgacatcgcggcggtgggatacgagacgccaccgggcaagggaggcattgcgacgcgac
cccgaaggcgtgtcctacgatccgctgcatgacgttcaggcgatggtcaccggcgacgcg
gccaggctgatcggcgatatcgcacggcggcgctgggaaagggccaccggcgaaaagcat
ggaccgcttgccgagagcttccctttcacatggccgcgcgatgttgccgtttcgctgaag
cagatccccgtgagcttcgtgctgacggagccggcgaccactttccgcgccggaatcagc
gatggcatcgcctcgactctcgatatcatcgcccgggcacggcggcagctttacatcgaa
gcgcaatatcttgcctccttccgcgtcgctgacgccctcgccgcgcggctgcaggaggaa
gatggccccgagatcgtcgtcatctgcacacgtctttcccatggcctgatcgaaaagctc
ttcatgggcggcaatcgcgaccgcgtcatccgccgcctcaagcgcgccgatcgtgccgac
cggttcagggtctatttccccgtcgtgcccgggccgccagtgcccggggcgtcagagccg
aggaaggccgacggggtggaggtgctcatccattccaagctgatcattgccgacgacgaa
ctgatccgcatcggctcctccaatctcaataaccgttcggagggattggattcggaatgc
gacatgcttctcgaggccggcaatgacgagcatcgcggcgcaatcgcggaactgcgccac
catctgctggccgaatatctcggaacgaccacggagacctttgccgcagcctatgcgcag
agcggctcgatcatccaagcagtcgacaagctcaatgatgggcctcggggcttgcgggaa
tttgccgtcgatctctcgggcagtatttcgccgatcaggggcaccgcgctcttcgacccg
gcgcggccattggggctcctagatcgactgggcctcggcgcgctcttccgtctcctgatc
cgccccgcgtaa
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