KEGG   Rhizobium sp. Kim5: Kim5_PC00406
Entry
Kim5_PC00406      CDS       T05501                                 
Name
(GenBank) type VI secretion system-associated protein
  KO
K11900  type VI secretion system protein ImpC
Organism
rhk  Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhk02044]
    Kim5_PC00406
Secretion system [BR:rhk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Kim5_PC00406
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: ARQ61817
LinkDB
Position
pRetKim5c:431414..432895
AA seq 493 aa
MTAETQLQTKEEVGFAPDESLLSKVVAATRQTEPDRAQDLLRTLTDQALKGTVTYDRNLT
ITLNNAIAEIDKAISSQLAAIMQSPEFTKLEGAWRGLHYLVKNSETSANLKIRVLNASKR
DIAKDLAKAVEFDQSRLFKSVYEDEFGTPGGEPMGALIGDYEFDNSFDDVQLLQGVSMIA
AAAFAPFISAASPRMFGFEDFRELAKPRDLEKIFETVEYAKWRSLRDSDDSRFVTLAMPR
VLARMPYGPKTSPIEEFNFDETGGSKTGELPHGSYCWMNAAYVMGTRLTEAFAKNGWCTA
IRGAENGGKVEGLPMHIFSSDDGDLDLKCPTEVGITDRRDAELGKLGFLPLCHYKNTDYA
VFFGAQTAHKPKLYDRPEATANAAVSARLPYMMATSRFAHYLKVMGRDKIGSFMEAEDCE
AWLNRWISNYVNANDDAGEESRAKYPLREAKVTVQEIPGRPGAYNAVAWMRPWLQMEELT
TSLRMVARIPSKN
NT seq 1482 nt   +upstreamnt  +downstreamnt
atgaccgccgaaacgcaattgcagacaaaggaagaagtaggcttcgcacccgatgagagc
ctgctctcgaaggtcgttgcggcaacccgccagaccgagcccgaccgcgcgcaggacctt
ctgcgcaccctcaccgatcaagccctgaagggcaccgtcacctatgatcgtaacctcacg
atcactttgaacaacgccattgccgagatcgacaaggcgatctcgagccagctcgcggca
atcatgcagtcgccggagttcaccaagctcgaaggcgcctggcgcggcctgcactatctg
gtcaagaacagcgagaccagcgccaacctgaagatccgcgtgctcaacgcctccaagcga
gacatcgccaaggatctcgccaaggccgtcgagttcgaccagtccaggctcttcaagtcg
gtctatgaagacgagttcggcactccaggcggcgaaccgatgggcgcgctgatcggcgac
tatgagttcgacaattccttcgacgacgtccagcttctgcaaggcgtctcgatgatcgcc
gccgccgccttcgccccgttcatctcggcggcgagcccccgcatgttcggcttcgaggat
ttccgggagctggcaaaaccccgcgatctggaaaagatcttcgagacggtcgaatacgcc
aagtggcgcagcctgcgcgacagcgatgattcccgcttcgtgacgctcgccatgccgcgc
gtgctcgcccgcatgccctacggtccgaagaccagcccgatcgaagaattcaacttcgac
gaaaccggcggctccaagaccggcgaactgccgcacggctcctattgctggatgaacgca
gcctatgtgatgggcacgcgtctcaccgaagctttcgccaagaacggctggtgcaccgcc
attcgcggcgcggaaaatggcggcaaggtcgaaggcctgccgatgcatatcttctccagc
gacgacggcgatctcgatctgaaatgcccgacggaagtcggcattaccgatcgccgcgac
gccgaactcggcaagctcggcttcctgccgctctgccactacaagaataccgactatgcg
gtgttcttcggggcgcagacagcccacaagccgaagctctacgaccggccggaggcaacc
gccaatgccgccgtttccgcccgccttccctatatgatggcaacctcgcgctttgcccat
tatctcaaggtcatgggccgcgataagatcggctccttcatggaagcggaagattgcgag
gcctggctcaaccgctggatctccaactatgtcaacgccaatgacgacgccggcgaggag
tcgcgggcgaaatatccgctgcgcgaggcaaaggtcaccgtccaggaaatccccggcagg
ccgggcgcttacaacgcagtggcctggatgcgtccgtggctgcagatggaggaattgacg
acctcgctgcgcatggtcgcgcggattccttcgaagaactga

DBGET integrated database retrieval system