KEGG   Rhizobium sp. Kim5: Kim5_PC00414
Entry
Kim5_PC00414      CDS       T05501                                 
Name
(GenBank) type VI/VI secretion system outer membrane protein
  KO
K11892  type VI secretion system protein ImpK
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Kim5_PC00414
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhk02044]
    Kim5_PC00414
Secretion system [BR:rhk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Kim5_PC00414
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: ARQ61825
LinkDB
Position
pRetKim5c:440986..442512
AA seq 508 aa
MKNEPASTWQSLPTIVELTEDGVKKKQSARKMAEMLEDVLDFPEAEKATAAALATGGASV
ETLVRDFRFGAEDVPTLVRSAAPLLNLAHGLRYTDEQPDIDELRSVAIAAVGRYERDLAS
ARISPERARAAHYVVCATVDDVVLSKAWGVRAGWARSGLVSTFHMDVTGGERVFDLLDHF
HQSPGANKDLLLLIYLCLSLAFEGRTRVSARGGLELARIRDSLYKTLLGQYGVFERELSP
HWKGVSARHQPLRTAAALWTLLSVLTLILAFGYLFFTLSLNRASDGTFERLANLPPRETP
SVLVKVPEPPRAPPPVVVAQTPPPPPPPQVKPPSRLDNLLAFLQPEVEKKLVTLSDSNGR
LLVRISNSGLFATGSAEVSEKFHDLLQRIGGALAAEKFRAVVVGYTDNVPIRTIQFPSNW
HLSEARAKAVGEILASFTGPGAILTEGRADSDPIAGNDTQEGREMNRRTEILVLTDPSER
LNDAGFKTAPIEAERPNAPAAAAGGASR
NT seq 1527 nt   +upstreamnt  +downstreamnt
atgaagaacgaacccgcctccacctggcaaagcctgccgaccatcgtcgaactcaccgag
gatggtgtgaagaaaaagcaatccgcccgaaagatggcggagatgctggaggacgttctc
gattttcccgaagccgagaaggcaacggcggcagcgctcgcgacgggcggagcatcggtc
gaaacactcgtacgggatttccgcttcggcgccgaagacgtgccgaccttggtgcgctcg
gccgcgccgctgctcaacctcgcccatggcctgcgctacacggacgagcagcccgatatc
gatgaactgaggtcggtggcaatcgcagcggtcggccgctacgagcgggatctcgccagc
gcgcgcatcagccccgagcgggcgcgtgccgcccattatgtcgtctgcgcgaccgtcgac
gacgtcgtgctcagcaaagcctggggcgtgcgcgccggctgggcccgttcgggcctcgtt
tccaccttccatatggatgtgaccggcggcgagcgggtgttcgatctgctcgatcatttc
caccagagccccggcgccaacaaggacctgctgctgctcatctatctctgcctgtcgctc
gccttcgagggccgcacccgcgtttccgcgcgcggcgggctggagctcgcccgcatccgc
gacagtctctataagacgctgctcggccaatacggcgtcttcgaacgggagctttctccg
cattggaaaggcgtttccgcccggcaccagccgctgcgcaccgccgccgccctttggacg
ctgctttccgtcctgacgctgatcctggctttcggctacctgttcttcacgctttcgctg
aaccgcgcctccgacggcacgttcgagcgccttgccaacctgccgccacgcgagacgcca
agcgtgctggtcaaggtgccggagccgccgcgcgcccctccgcctgttgtcgtcgcgcaa
acgccgccgccaccgccaccgccgcaggtaaagccaccgagccgtctcgacaatctgctc
gccttcctccagccggaggtcgagaagaagcttgtcacgctgtcggattcgaatggcagg
ctgctcgtgcgtatcagcaattccggcctgtttgccaccggcagcgccgaagtcagcgag
aaattccacgatctcctgcagcgcatcggcggcgcgctcgccgcggagaaattccgcgcc
gtcgtcgtaggctatacggacaatgtgccgatccgcaccatccagttcccatccaactgg
cacctgtcggaagcccgcgccaaggcggtcggcgaaatcctcgcatcattcaccgggccg
ggggcgatcctgaccgagggacgcgccgacagcgatccgatcgccggcaacgacacgcag
gagggccgggagatgaaccgccgcaccgagatcctggtgctgaccgatccgagcgaacgg
ctgaacgacgccggtttcaagacagcgccgatcgaggccgaaagaccgaatgcaccggct
gccgccgcaggaggcgcttcgcgatga

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