KEGG   Rhizobium sp. Kim5: Kim5_PC00415
Entry
Kim5_PC00415      CDS       T05501                                 
Name
(GenBank) type VI secretion system IcmF family protein
  KO
K11891  type VI secretion system protein ImpL
Organism
rhk  Rhizobium sp. Kim5
Pathway
rhk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Kim5_PC00415
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhk02044]
    Kim5_PC00415
Secretion system [BR:rhk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Kim5_PC00415
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C DUF4199 IcmF_helical
Other DBs
NCBI-ProteinID: ARQ61826
LinkDB
Position
pRetKim5c:442512..445988
AA seq 1158 aa
MNPLSYFYTLRSYVEAYAGLLGRRFISIIWVAAICVVIWFYGYLAAYGDFKPLASASARL
TLIGVIIAAWLAYLLFTVIRDRRRDKQLVEGIERDAEAEAAASQQAEVGEIHSRLKEALQ
FLRRITKRRFGYIYELPWYVIFGAPGSGKTTALTNSGLKFPLGDALGSNSVQGIGGTRNC
NWWFTDEAILIDTAGRYTTQDDLNGTAKAGWEGFLGLLRKYRRSQPINGALVTLSIGDLL
TRDPEAQREEIRAIRQRLSELDELLHARVPVYLLLTKADLLTGFVEFFDGFNKSDREQVW
GTTFGLDESYKAANLPERFTEEFTLLQQRIDAMLIERLQQEPNPELRGRIFRFPAELASL
KERLHEVTTELCSGSKLVDAPLLRGIYFASGTQREEAAATPRMRRSYFLSRLFKEVIFGE
ASLVARDKRLSGRQLLFRRAAYASAVLLLAVVLTSWTATYFQNTTALAGAERRIDAYEQL
VRGVPVRDVSDADFLRILPALDNLAAVTTDFSKTRVWPVSLGLDQDGKVASRQREAYQRA
LNTLLLPRMLVQLQKEMTETTDVNRTFDALKLYGMLGGLGPMNADFASLEAEDMFTRLYP
DEGRTAARNALITHAEAMARGALPPIDLDKTLIAKARDIIRSQNIASRAYDILAEYRASR
ALPGWSPAGALGPLGEQVFERTSKAPLGESIPGLFSATGYRTVVLPEISEAAREALDEQW
VRGVPNPAGVTVDTIAQATLQLYFDKFDQRWSTLLTDIRVKPSQTISDAAETTRILAGKP
GPVETIANSIAAATDLRGPAAEIASAADGNLSVSTTALSSAANAPDPFGRLRDALKTPAG
QSPLPDQSKEAPRSEIGQLEPILQKVQEQLSRATTSTAEVAKVFDVDSQLTDANQDLLQQ
ARKLPAPIDTWMAGLAADVGSLAVKSARSRISDAWAAEGAGFCSNVVAGRYPFDRKSARD
VAMSDFVRLFGPEGLFKTFFKEKLEAFVDTSASPWGWKGTFGASSIPSAAIAQFENADKI
NRAFFPAGSKDPSITINVKPVSLTDAASAVMLEIEGERVVYFHGPVQAKSITWPSTEANN
TSRIAFQPGGWQQALTENGDWSPFRLFDDANVTVQGDDLFRAQFEQDGRAAEFDVQFGSV
LNPFRLEALGAFSCPAQF
NT seq 3477 nt   +upstreamnt  +downstreamnt
atgaatcccttaagttatttctatacgctgcgttcctatgtggaagcctatgccggcctt
ctcggccgccgcttcatctcgatcatatgggtggcggcgatctgcgtcgtcatctggttc
tacggctatctcgccgcctatggcgacttcaagccgctggcgagcgcctcggcgcggctg
acgctgattggcgtcatcattgccgcctggctcgcctacctcctgttcaccgtgatccgc
gaccgccgtcgcgacaagcagctcgtcgaagggatcgagcgtgacgccgaggccgaagcg
gcggccagccagcaggctgaggtcggcgagatccacagccggctgaaggaggcgttgcag
ttcctgcgccgcatcaccaagcgacgcttcggctatatttacgagctgccctggtacgtg
atcttcggcgcgccgggctccggcaagacgacggcgctcaccaattccggcctcaaattc
ccgctcggcgatgcgctcggcagcaactcggttcagggcatcggcggcacacgcaactgc
aattggtggttcaccgacgaggcaatcctcatcgataccgccggccgctacaccacgcag
gacgatctgaacggcaccgccaaggccggctgggaaggctttctcggtctcctcaggaaa
tatcgccggtcgcagccgatcaatggcgcgctggtgacgctgtcgatcggcgatctgttg
acacgcgatcccgaagcccagcgcgaggaaatccgggcgatccgccagcggctgtccgag
ctcgatgaactcctgcatgcgcgcgtgccggtctatctgctcctgaccaaggccgatctc
ctgaccggcttcgtcgaattcttcgacggcttcaacaagagcgaccgcgaacaggtctgg
ggcacgaccttcgggctcgacgaaagctataaggcggccaacctgccggaacgcttcaca
gaggaattcaccctgctgcagcaacgcatcgacgccatgctgatcgagcgcctgcagcag
gagcccaatccggagctgcgcggccgcatcttccgtttccccgccgagctcgcctcgctg
aaggagcgcctgcatgaagtgacgacggagctttgctcgggctcgaaactggtcgacgcg
ccgctcctgcgcggcatctatttcgcctccggcacccagagggaggaagcagccgccaca
ccgcgcatgcggcgcagctatttcctctcgcgcctcttcaaggaggtgatcttcggcgag
gcttcgctggtcgcccgcgacaagcggctttccggccggcagctcctcttccgccgcgcc
gcttacgcgagcgcggtcctgctgctggccgtggtgctgaccagctggacggccacctac
ttccagaacaccacggcgctcgccggtgcggaaagacgcatcgatgcctatgagcagctg
gtgcgcggcgtgccggtgcgcgacgtctcggatgcggatttcctacgcatcttgccggcg
cttgataatctcgctgccgtcactaccgatttttcgaagacgcgcgtctggccggtgagc
ctcggcctcgatcaggacggcaaggtcgcgagccgccagcgcgaagcctatcagcgggcg
ctgaacacgctgctcctaccccgcatgctggtgcagctccagaaggagatgaccgagacc
accgacgtcaacagaaccttcgacgctctgaaactctacggcatgcttggcgggctcggc
ccgatgaatgcggatttcgcctccctggaagcggaagacatgttcaccaggctctatccc
gacgaaggccgtaccgcggcgcgcaacgcgctgatcacccatgcggaagccatggcgcgc
ggcgcgctgccgccgatcgatctcgacaagacgctgatcgccaaggcacgcgacatcatc
cgatcgcagaacatcgccagccgcgcctatgatatcctggcggaataccgcgcctcccgc
gcccttcccggctggagtccggccggtgcgctcggcccgctcggcgaacaggtattcgag
cggacctccaaggcgccgcttggcgagagcatccccggccttttttccgcgaccggctac
cgcacggtcgttctgcccgagatcagcgaggccgcgcgggaggcactcgacgagcagtgg
gttcgcggcgtccccaatcccgccggtgtcacggtcgacaccatcgcccaagccacactt
cagctttacttcgacaagttcgatcaacgctggtcgaccctcttgaccgatatcagggtc
aaaccttcgcagacgatcagcgacgcggctgagaccacccggatcctcgccggcaagccc
ggccccgttgagacgatcgcgaattcgatcgccgcggccaccgatctgcgcggccccgcc
gccgagatcgcctcggctgccgacggcaatttgagcgtctcaacaacggcgctgagcagt
gccgccaatgcgcccgatcccttcggccgtcttcgagacgcgctgaagacgccggccggc
caatcgccgcttcccgaccaatcgaaggaggcgccgcgctcggaaatcgggcagctggaa
ccgatcctgcagaaagtgcaggagcagctttcgcgggcgacgacctctacggccgaagtg
gcgaaagtcttcgacgtcgatagccagctgaccgacgccaatcaggacttgctgcagcag
gcccggaagttgccggcgccgatcgatacatggatggcggggctcgccgccgatgtcgga
tcgctggcggtcaaatccgcccgttcgcgcatcagcgacgcctgggccgcggagggtgcc
ggtttctgctcgaatgtcgtggccggccgttatcccttcgatcgaaaatccgcgcgcgac
gtggcgatgagcgacttcgtcaggctgttcggtcccgagggactgttcaagacctttttc
aaggagaagcttgaggcctttgtcgataccagcgcttcgccatggggctggaagggcact
ttcggggcgtcgagcattccgagcgcggcgatcgcccagttcgagaatgccgacaagatc
aaccgcgccttcttcccggccggcagcaaggacccgtcgatcacgatcaacgtgaagccg
gtgtcgctgaccgatgccgccagcgcggtgatgctggagatcgagggcgaacgcgttgtc
tatttccatggaccggtccaggcgaaatcgatcacatggccgtcgacggaagcgaacaac
acctcgcgcatcgccttccagccgggcggctggcagcaggccttgaccgagaacggcgac
tggtcgcccttccgcctcttcgacgatgccaatgtcacggtgcagggcgacgatctgttc
agggcacaatttgagcaggacggccgggcggcggagttcgatgtgcagttcggttcggtg
ctcaatccattccggctggaggcgctcggcgccttctcatgcccggcgcaattctga

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