Rhizobium sp. Kim5: Kim5_PC00494
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Entry
Kim5_PC00494 CDS
T05501
Name
(GenBank) alpha-mannosidase domain-containing protein
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Kim5_PC00494
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rhk04131
]
Kim5_PC00494
Enzymes [BR:
rhk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
Kim5_PC00494
Membrane trafficking [BR:
rhk04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
Kim5_PC00494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Glyco_hydro38C2
Glyco_hydro_57
DUF3560
Motif
Other DBs
NCBI-ProteinID:
ARQ61905
LinkDB
All DBs
Position
pRetKim5c:complement(531827..534853)
Genome browser
AA seq
1008 aa
AA seq
DB search
MPLTIAQRLDRLKVRIAELAHWRDRQSSPIDGWTFEGEPIGHHQDWPHRQGVVHFAAEAE
APAGWPLEDIRLQLDLGGESLITLSYPDGESETFGLDPYHQEFPVRGRRFSIATESVARF
PFGEPNRTPRLNKARLIWLDGPAHRLHLLLKQVAEAIEVLGDHEVVPHMMDAAEQALRSL
DWPSDTAAYVSRTADAVMQQKIWELPELEDNPAGLSDEQSASAASAFEELTARLKELQKR
FPANGELVLTGHAHIDLAWLWPYRETRRKMRRTFNTALSLMERSADFRFNQSTAHYYAQM
EEEDPELLDRIKKKVAEGKWETLGGMWVEPDTNMPTGESLARQVLYGQRYFEKTFGARHT
VCWLPDCFGFSGALPQILRQGGIDSFFTIKVNWSETNHIPSDLFWWKGLDGSKVLTHTFD
NPMQGYNGFVQADCYLPTWKNFRGKVQHHASLLAVGYGDGGGGVTPEMVEREVQLRDFPA
IPQARWGTVKGFYEEAHRTASEKNLPVWDGEIYLELHRATLTTQSGVKRKHRQAERALIT
AETLASLAHMLGAEKPRSLEADWRVVLKNEFHDILPGSSIREVYQDAEQELGGVIEHAKA
EQAKGLQLLSAQLPKGSVGDALVVVNPSLVPRPLSATLADGTVVSAAENVAPLSVAVFDR
QALQPAAGLKASSDRLENDHLAVVIGRDGAVASLLHKASGREAVDGSANQLWVYPADKPR
NWDAWDIDADYAEKAVRLEAPESIGLVESGPHRAAIRVVHRYRNSSVTQTYVLTANAKRL
DIETTIDWHDRRTLLRTLNPVDVRSRKATFECAFGVVERATHTNTSWEQAMFEAVAHRFV
DISEPGFGVALLNNAKYGHSARGNVIGMSLVRGPIYPDPLADEGEQNFTYALMPHDGAWH
ESCVLDEALDLNQPLVTAEAHGLSVGTFAPLAVSGTPVAFSGLKPAEEGDGLILRLYEPA
GRRGRLSLNLPSGWSASQPLNILEEPMERQGPADIMPFEIRTWRLRKG
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgaccattgcccaacgcctcgatcgcctcaaagtccgcattgcggagctcgcg
cattggcgggatcggcagagtagcccgatcgacggctggaccttcgaaggcgagccgatc
ggccatcatcaggactggccgcatcgccagggcgtcgtgcattttgctgcggaagctgag
gcgccggcgggctggccgctcgaggatatccgcctgcagctcgatctcggcggcgagagc
ctgatcacgctgagctatcctgatggcgagagcgagacgttcggactcgatccctaccat
caggaatttccggtcaggggccgccgcttttcgattgcgacggaaagcgtcgcgcgcttt
ccctttggcgagccgaaccggacgccgcggctcaacaaggcccggctgatctggctcgac
ggcccggcccatcgcctgcatcttctgttgaagcaggtggccgaagcgatcgaggtgctc
ggcgatcatgaagtcgtgccgcatatgatggatgcggccgagcaggccttgcgcagcctc
gactggccgtcggataccgccgcttacgtctcccgcaccgccgatgccgtcatgcagcag
aagatctgggagctgccggaactcgaggacaatccggcgggcctctccgacgagcagagc
gcttctgccgcctccgccttcgaggagctgacggcgcggctgaaggaattgcagaagcgc
tttcctgccaatggcgagctggtgctgaccggccatgcgcatatcgatctcgcctggctc
tggccctatcgcgagacgcggcggaagatgcggcgcaccttcaacacggcgctgtcgctg
atggagcgctcagccgatttccgcttcaaccaatcgaccgcccattattacgcgcagatg
gaagaggaagacccggagcttctcgatcgcatcaagaagaaggtcgcggaaggtaagtgg
gaaaccctcggcggcatgtgggtggagcccgataccaacatgcccacaggcgaaagtctc
gcccgccaggttctctacggccagcgctatttcgaaaagaccttcggcgcgcgccatacg
gtctgctggctgccggactgcttcggcttctccggcgcgctgccgcagatcctgagacag
ggcggcatcgacagcttcttcaccatcaaggtcaattggagcgagaccaatcacattccc
tccgatctcttctggtggaagggcctcgacggcagcaaggtgctgacccacaccttcgat
aacccgatgcagggttataacggcttcgtgcaggccgattgctatctgccgacctggaag
aatttccgcggcaaggtgcagcatcatgcctcgcttctcgctgtcggctatggcgacggc
ggcggcggcgtgacgcctgaaatggtggagcgcgaagtgcagctgcgcgattttccggcc
atcccgcaggcgcgctggggcacggtcaaaggcttctacgaagaggcgcaccgaactgca
tcggagaagaacctgcccgtctgggatggcgagatttatctcgaactgcaccgggcgacg
ctgacgacgcaaagcggcgtcaagcgcaaacaccgccaggccgaacgggcgctgatcacc
gccgagacgctggcgtcgctcgcccacatgctcggagctgaaaagccgaggagccttgag
gcggattggcgcgtggtgctgaagaacgaattccacgacatcttgcctggttcgagcatc
cgcgaggtttatcaggacgcggagcaggagctcggcggggtcatcgagcacgccaaggcc
gaacaggccaagggcttgcagctattgtcggcccagctaccgaaaggcagcgtcggcgat
gcgcttgtcgtcgtcaacccgtcgcttgtgccgcggcccctcagcgccacgctcgccgac
ggcaccgtcgtctcggccgccgaaaatgtcgcacccctgtccgtcgccgtcttcgaccgg
caggcgctgcagccggcggccgggctcaaggcgagttccgatcgcctcgaaaacgatcat
ctcgccgtcgtcatcggcagggacggcgcggtcgcgagcctccttcacaaggcgagcggc
cgtgaggcggtcgacggctcggcaaaccagctctgggtctatccggccgacaagccgcgc
aactgggacgcctgggatatcgatgccgattatgccgaaaaggccgtccgtctcgaagcg
cccgaaagcatcggcctcgtcgaaagcggcccgcatcgcgcggcgatccgcgtcgtccat
cgctaccgcaattcgagcgtcacgcaaacctatgtccttacggcgaacgccaagcggctc
gacatcgaaacgacgatcgactggcatgaccgccgcactctgttgcgcacgctgaacccc
gtcgacgtcaggtcgcgcaaggcgaccttcgaatgcgcgttcggcgtggtcgagcgggcg
acgcacaccaacacctcctgggaacaggcgatgtttgaggccgtcgcccatcgttttgtc
gatatcagtgagccgggcttcggagtcgcgctgctcaacaatgccaaatacggtcacagc
gctcgcggcaatgtgatcggcatgagcctggtgcgcggaccgatctatccggatccgctg
gccgacgaaggcgagcagaacttcacctatgcgctgatgccgcatgacggcgcctggcat
gaaagctgcgtgctggatgaagcgctcgacctgaaccagccgctcgtcaccgcagaagcc
cacggcctctccgtcggcactttcgcgccgcttgccgtctccggtacgcccgtcgccttc
tcgggcctgaagcccgcggaagagggcgacggcctcatcctgcgcctctacgaacccgcc
ggccggcgcggccgcctctctctcaacctgccttccggatggagcgcgtcgcagccgctc
aacattcttgaagagccgatggagcgccaaggaccggcagacatcatgccgttcgaaatc
cggacttggagactgcggaagggctga
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integrated database retrieval system
