Rhizobium sp. Kim5: Kim5_PD00043
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Entry
Kim5_PD00043 CDS
T05501
Name
(GenBank) alpha-L-rhamnosidase domain-containing protein
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00946
Degradation of flavonoids
rhk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
Kim5_PD00043
Enzymes [BR:
rhk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
Kim5_PD00043
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Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
Motif
Other DBs
NCBI-ProteinID:
ARQ62051
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Position
pRetKim5d:complement(37384..39705)
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AA seq
773 aa
AA seq
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MNFQPAAISGDRVSRAWSGDMIAPLSDRGQGTAASFVSKTFDHEGAGLPIELFISALGLY
RCFINGTRVGNDVLTPGWTNYDDRIAYQRYDISKLLKPGPNRIEIWLADGWYRSPIMWGA
KAIPNCWGDRIGAIADLVGPSGPLLSTDTTWQSGPLPILKSGIYFGEIFDARLENAAETH
GVERLPFDKGLLVAHETAAVRELQPLAPIDSWSDDEGRTIYDFGQNAGGYVRYRVRGAGG
AEVRVEHAEVLGPDRHFDNRNYRAAAAHTLYTLRGDGDETYAPHFTFHGFRYARVTINGN
AKIVEIASIPISSVPEPAGGFTSGNSLVNRLVQNTIWSQRANFVEVPTDCPQRDERLGWT
GDAQVFAATACWLSDSQSFLSKYLRDVMADQREDGAVSHFSPDPTRLHPADFPGYAGSTG
WGDAIVVIPWVLYTHYGNRAVLSECLDPMVRWVDFVWSISDGPIVRPPSHWGARGFTFGD
WLQPVGDNRKPRPTIADDCAATIYHFISTDLLARIAAVLGEEALEEQMKRRAGEIRLAFA
NEFITPAGRLAHNDQTSYALAFLYDLIPAEHRQAAQQHFRKVIIDADYKIGTGFIGTPAL
LPALTKLGMDDLAEKVFLQEDVPGWLYQVSKGATTIWERWDSMAPDGTIYEPDMNSYNHY
AYGAVCQWLFECVAGISPSPEAPGFAEVIVDPAPIPSLSPVSAYHDISQGRIKAGWHCTG
SEITYVLTLPEGCVGRFRPGRRHQNPTLNGEPVFEDAVLSPGTHRLVFSLPDS
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaactttcagccggcagccatcagcggcgatcgcgtttcgcgcgcttggtctggagac
atgatcgcaccactgtcggaccgcggccagggaacggccgcaagcttcgtctccaagacc
ttcgatcacgaaggtgccggccttccgatcgaactcttcatctcggcgctcggcctttat
cgctgcttcatcaacggcacccgcgtcgggaacgacgtgctgacgcccggctggacgaat
tacgacgaccgcattgcctatcagcgctatgacatctcgaaactgttgaaacccggcccc
aaccggatagaaatctggcttgcggacggatggtaccgctcgcccatcatgtggggcgcc
aaggctattcccaactgctggggcgacaggatcggcgccattgcggatttggtcggccct
agcggtcccctactttccaccgatacgacctggcaaagcggtcctctgccgatactgaag
tcggggatttacttcggcgagattttcgacgcacgtctcgaaaacgccgcggaaacgcat
ggggtcgagcgattgccgttcgacaaaggactgctcgtcgcgcatgagacggcagcggtg
cgggagttacagccgctcgccccgatcgacagctggagcgatgatgaaggcaggacgatc
tatgacttcggccagaatgccggcggctatgtcaggtacagggtccgcggcgcaggcggc
gccgaagtgcgggtggagcatgcggaagtcctcggccccgatcgccatttcgacaatcgc
aactatcgtgcggccgcagcgcacaccctctatacgctgcgcggagacggcgacgagacc
tatgcgccgcatttcaccttccacggcttccgttatgcgcgggtcacgatcaacggcaat
gcaaaaatcgtcgaaatcgcgtcgatcccgatctcgtcggtgccggaacccgccggtggc
ttcacttcaggcaattctctcgtcaatcgcctggtgcagaacaccatctggtcgcagcgc
gccaatttcgtcgaggtacccacagattgcccgcagcgcgacgaacgcctgggctggacg
ggcgacgcgcaggtctttgccgcaaccgcgtgctggctgagcgacagccagtccttcctc
agcaaatatctgcgcgacgtaatggccgaccagcgcgaggacggggccgtatcacatttc
tcgccggatcccactcgcctgcatcccgccgacttcccgggctatgccggctcgaccggc
tggggcgacgcgatcgtcgtcatcccctgggtgctctacacccactacggcaatcgggcc
gttctttcggaatgcctggatcccatggtgcgctgggtcgatttcgtctggtccatttcg
gatggtccgatcgtgcgtccgccgtcgcactggggtgcgcgcggcttcactttcggcgac
tggctgcaaccggtcggcgacaacagaaagccgcgcccgacgatcgccgacgattgtgcg
gccaccatctaccacttcatctcgacagatcttctggcaaggatcgccgccgttctcggc
gaagaggcgcttgaagagcagatgaagcggcgcgccggagaaatcaggctggcctttgcc
aacgagttcatcacgccggcgggacggctcgctcacaacgaccagacctcctatgcgctc
gctttcctctacgatctgataccggctgagcacaggcaagccgcacagcaacatttccgc
aaggtcatcatcgatgccgactacaagatcggcaccggcttcatcggcacccctgccctt
ttgccggcgctgacgaagctcggaatggacgatctggccgaaaaggtcttcctgcaggaa
gacgtgccgggctggctctatcaggtctcgaagggagcgacgacgatctgggagcgctgg
gattcgatggcgcccgacggtaccatctacgagccagacatgaacagctacaatcattac
gcctatggggcggtctgccaatggctgttcgaatgcgtcgccggcatttcgccgagcccg
gaagcgccaggatttgcagaagtgattgtcgatcccgcgccgatcccgtcgctttccccg
gtttcagcctatcacgatatcagccaggggcgcataaaggccggttggcactgcaccggc
agcgagatcacctatgtgctgacgctgccggagggttgcgtcggccgcttccggcccggc
cggcggcaccagaacccgacgctcaatggggagcctgtcttcgaggatgcggttctttcc
ccgggcacgcaccggctggtcttttccctacccgattcctga
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