Rhizobium sp. Kim5: Kim5_PD00048
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Entry
Kim5_PD00048 CDS
T05501
Name
(GenBank) LacI family transcription regulator protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
rhk
Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhk03000
]
Kim5_PD00048
Transcription factors [BR:
rhk03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Kim5_PD00048
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_7
HTH_31
HTH_Tnp_ISL3
HTH_23
HTH_AraC
HTH_26
HTH_Crp_2
HTH_24
YdaS_toxin
Motif
Other DBs
NCBI-ProteinID:
ARQ62056
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All DBs
Position
pRetKim5d:complement(44076..45083)
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AA seq
335 aa
AA seq
DB search
MSRPKDPEFKITIADVARAAGVSPMTVSRVLNDQGGASAETTQRILSAASQLNYRPNPFA
RGLRSDRSKTIGLLVPDITNPFFPEVIRGAEDAASAAGYNLLLSNVVENSKREGELIEAL
LRHRVDGIIVCSPRLPDAALHKALAPHRAVVLINREAPNEIAGTIVTDYEVGASRAIDHL
VERGRRKIAIIAGPRSSFGGKSRLIGFRKTLAAHGIEAQAIVHCDPTAAGGQTAAAQLLA
EIPGIDALICYNDLNAIGAMKACRAAGISIPEQIALIGFDDIPAAELLSPALTTLRVHKR
EMGEEAVRLLLSRIATKNRQHGIVIVPELIIRETT
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgccccaaagatccagaattcaagataaccattgccgatgtcgcgcgcgccgca
ggcgtgtcgccgatgaccgtgtcgcgcgtgctcaacgaccaggggggagccagcgcggaa
accacccagcgaattctttcggcggcgagccagctcaactaccgacctaatcctttcgcg
cgcggattgcggtccgatcgctcgaagaccatcggccttctcgttcctgacatcaccaat
ccgttttttcccgaagtcatacggggggcggaggatgcggcgagcgcggccggctacaat
ttgcttctgtccaatgtcgtcgagaacagcaagcgggagggagaactcatcgaggcattg
ctcaggcatcgggtcgacgggatcatcgtctgcagcccgcggctgccagacgccgcactg
cacaaggcgctggcgccgcaccgcgccgtcgtgctcatcaaccgcgaggctccaaacgag
atcgcgggaaccatcgttacggactatgaggtcggcgcatcgcgcgccatcgaccatctg
gtagagcgcggacggcgcaagatcgcgatcatcgccgggccgcgcagctcgttcggcggc
aagagccgtcttatcggtttccgcaagacactggccgcccacggaattgaggcgcaggcg
atcgtccattgcgacccgaccgcggccggcgggcagacggccgccgcgcaattgctggca
gaaatccccggcatcgatgccctgatctgctacaacgacctcaacgctatcggcgccatg
aaagcctgccgggctgccggcatttccattcccgaacaaatcgcgctgatcggcttcgac
gacatcccggcggccgaattgctgtctccggcgctgacgacgctgcgggtgcataagcgg
gaaatgggcgaggaagccgtgcgcctgctgctcagccgcatcgccaccaagaaccgtcag
cacggcatcgtcatcgtgcccgaactcatcatccgcgaaacgacctga
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